Click here to switch to the map view.

The map label for this gene is tolB [H]

Identifier: 21228038

GI number: 21228038

Start: 2304088

End: 2305212

Strand: Reverse

Name: tolB [H]

Synonym: MM_1936

Alternate gene names: 21228038

Gene position: 2305212-2304088 (Counterclockwise)

Preceding gene: 21228039

Following gene: 21228037

Centisome position: 56.27

GC content: 45.51

Gene sequence:

>1125_bases
TTGAAGCGTAACATCTTTTCAATTGGTTTTATTTCAGTTGTTTTATTCATTGTACTGGGCGCATGTGTAGGTCTGGCTGC
CAGCGAGGCTTTGCAGGGAAGCGAGCAGGAGATTAACTCGGCTTTTAGCAATCAGATCACCCCTGTAATTTCAGGAGACT
ATATTGTCTGGCAGGATGAGCGGGACGGAAACTGGGACATCTACATGTATGACATGTCCGCTGGAAGGACGGAAACTTCC
CTGTTTAACGGTCCAAAAGATGAAATTGAGCCTGCAATCTCAGGCAGCCGTGTGGTTCTGGCAGATAACAGGAGAGGAAA
TTATGATATATACATGTATGATATCTCCACTAAAAAGGAAGTTCAGGTTACTTCGGATAAATCCGAGCAGAAAGAGCCTG
CAATCTCAGAAGATATAATTGTCTGGACAGACCGAAGGAACCAGAACACAGATATCTACATGTACGATCTCACCACGAAA
GAGGAAACCCGGATTACAGATGATAAAGCTGACCAGAGCCAGCCTGCAGTCTGGGGAAACATCATAGTCTGGAAAGATAC
ACGGAATGGGAATGAAGATATTTACATGTACGACATCAGCGCAGGGAAAGAAAGCCCTGTGGTAATGGATTCTGCGGCAC
AGACAAACCCTGTCATAGAAGGCGATTACATCGTATGGGAGGACAGGCGTGCAGGAAACCTTGACATTTACATGTACGAG
ATTTCCACCGGAAAAGAAAAACCTGTCTGCACCGACCCCTCCCCGCAGAAAACCCCTGCTATCTCGGACGGAAGGATAGT
CTGGGCTGACGGGAGAATTAAAGGGACAAACATCTTTATATATGATATCGCCACAGGGCAGGAAAAGACGGTTTCCACAG
CATCCGAATATGAAAGCAACCCCTCAATAGACGGCAACAGGATAGTCTGGCAGGACAAGCGTAAAGGCGCAATGGACATT
TTTATGTTTACTGAAGACGCTTCAGAAACCGAATCAACTGCAGGAGAAAAAACAGAAGCTGAAACAGGCTCAAAAGCGCC
TCTCGGGATATATCCTGTATCAGCCGGGGTTATAGCGGCATATCTTATGATAAATTCAGGGAAAAAAGGGAAAAGAAAAA
CATAA

Upstream 100 bases:

>100_bases
TAAACGAAAAACAGGTTTAACCAATAGTCCTGAGTTGAAAAGCACACTATATTAAAACAACCCGTACTGAAATGCGAGAG
GGAATACCGGAAGTGTAACT

Downstream 100 bases:

>100_bases
GCCTGTAACCCAGATCCTGGAGAGCAGGTAATGCAGAGACTTAATGAATAAATAGAAAGTGAGAATATTAACTGTCATGG
GTAAAAGTTCGGAAGAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKRNIFSIGFISVVLFIVLGACVGLAASEALQGSEQEINSAFSNQITPVISGDYIVWQDERDGNWDIYMYDMSAGRTETS
LFNGPKDEIEPAISGSRVVLADNRRGNYDIYMYDISTKKEVQVTSDKSEQKEPAISEDIIVWTDRRNQNTDIYMYDLTTK
EETRITDDKADQSQPAVWGNIIVWKDTRNGNEDIYMYDISAGKESPVVMDSAAQTNPVIEGDYIVWEDRRAGNLDIYMYE
ISTGKEKPVCTDPSPQKTPAISDGRIVWADGRIKGTNIFIYDIATGQEKTVSTASEYESNPSIDGNRIVWQDKRKGAMDI
FMFTEDASETESTAGEKTEAETGSKAPLGIYPVSAGVIAAYLMINSGKKGKRKT

Sequences:

>Translated_374_residues
MKRNIFSIGFISVVLFIVLGACVGLAASEALQGSEQEINSAFSNQITPVISGDYIVWQDERDGNWDIYMYDMSAGRTETS
LFNGPKDEIEPAISGSRVVLADNRRGNYDIYMYDISTKKEVQVTSDKSEQKEPAISEDIIVWTDRRNQNTDIYMYDLTTK
EETRITDDKADQSQPAVWGNIIVWKDTRNGNEDIYMYDISAGKESPVVMDSAAQTNPVIEGDYIVWEDRRAGNLDIYMYE
ISTGKEKPVCTDPSPQKTPAISDGRIVWADGRIKGTNIFIYDIATGQEKTVSTASEYESNPSIDGNRIVWQDKRKGAMDI
FMFTEDASETESTAGEKTEAETGSKAPLGIYPVSAGVIAAYLMINSGKKGKRKT
>Mature_374_residues
MKRNIFSIGFISVVLFIVLGACVGLAASEALQGSEQEINSAFSNQITPVISGDYIVWQDERDGNWDIYMYDMSAGRTETS
LFNGPKDEIEPAISGSRVVLADNRRGNYDIYMYDISTKKEVQVTSDKSEQKEPAISEDIIVWTDRRNQNTDIYMYDLTTK
EETRITDDKADQSQPAVWGNIIVWKDTRNGNEDIYMYDISAGKESPVVMDSAAQTNPVIEGDYIVWEDRRAGNLDIYMYE
ISTGKEKPVCTDPSPQKTPAISDGRIVWADGRIKGTNIFIYDIATGQEKTVSTASEYESNPSIDGNRIVWQDKRKGAMDI
FMFTEDASETESTAGEKTEAETGSKAPLGIYPVSAGVIAAYLMINSGKKGKRKT

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 41646; Mature: 41646

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNIFSIGFISVVLFIVLGACVGLAASEALQGSEQEINSAFSNQITPVISGDYIVWQDE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCEEEEECC
RDGNWDIYMYDMSAGRTETSLFNGPKDEIEPAISGSRVVLADNRRGNYDIYMYDISTKKE
CCCCEEEEEEECCCCCCCHHHCCCCHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCE
VQVTSDKSEQKEPAISEDIIVWTDRRNQNTDIYMYDLTTKEETRITDDKADQSQPAVWGN
EEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
IIVWKDTRNGNEDIYMYDISAGKESPVVMDSAAQTNPVIEGDYIVWEDRRAGNLDIYMYE
EEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEECCEEEECCCCCCCEEEEEEE
ISTGKEKPVCTDPSPQKTPAISDGRIVWADGRIKGTNIFIYDIATGQEKTVSTASEYESN
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEECCCCCHHHCCHHHCCCC
PSIDGNRIVWQDKRKGAMDIFMFTEDASETESTAGEKTEAETGSKAPLGIYPVSAGVIAA
CCCCCCEEEEECCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCEEEEECCHHHEEE
YLMINSGKKGKRKT
EEEEECCCCCCCCC
>Mature Secondary Structure
MKRNIFSIGFISVVLFIVLGACVGLAASEALQGSEQEINSAFSNQITPVISGDYIVWQDE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCEEEEECC
RDGNWDIYMYDMSAGRTETSLFNGPKDEIEPAISGSRVVLADNRRGNYDIYMYDISTKKE
CCCCEEEEEEECCCCCCCHHHCCCCHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCE
VQVTSDKSEQKEPAISEDIIVWTDRRNQNTDIYMYDLTTKEETRITDDKADQSQPAVWGN
EEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
IIVWKDTRNGNEDIYMYDISAGKESPVVMDSAAQTNPVIEGDYIVWEDRRAGNLDIYMYE
EEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEECCEEEECCCCCCCEEEEEEE
ISTGKEKPVCTDPSPQKTPAISDGRIVWADGRIKGTNIFIYDIATGQEKTVSTASEYESN
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEECCCCCHHHCCHHHCCCC
PSIDGNRIVWQDKRKGAMDIFMFTEDASETESTAGEKTEAETGSKAPLGIYPVSAGVIAA
CCCCCCEEEEECCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCEEEEECCHHHEEE
YLMINSGKKGKRKT
EEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA