| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228022
Identifier: 21228022
GI number: 21228022
Start: 2285335
End: 2285625
Strand: Direct
Name: 21228022
Synonym: MM_1920
Alternate gene names: NA
Gene position: 2285335-2285625 (Clockwise)
Preceding gene: 21228021
Following gene: 21228025
Centisome position: 55.79
GC content: 39.18
Gene sequence:
>291_bases ATGGAAAATGCTGACCGGCACAAAGAGTTGTTCGAAAAAATCTCTTCTTTCCTTGAAAAAGAAGGAGCAACGAAAGTAGC TGTTTTTGGCTCTTATGCAAGAGGAGAAGAAAAGCCGGAAAGTGATATTGATATTCTTGTGGAGTTTTCCGAAACAAAAG GTCTGTTAAACCTTGTAAGAATTGAAAGGGAGCTATCAGAGTTTCTTGGGTTAAAGGTCGATTTGCTTACCGAAGAGTCG ATAAGCCCTTATCTAATTGATGGGATTAAAAGGGAAGCAAAAGTCCTCTAG
Upstream 100 bases:
>100_bases ATAGCTAAGAGACTGCTTTGGCTTTAATTTTTTATTTTTCTCAATGTCCTCTTCACTCAATCAGGATATCTTTAAATGAT CACAAACAAAATATACTAAC
Downstream 100 bases:
>100_bases GTATAAAATTAAGAGGATTCTTTACCTATGTGGCAGCAAACTACGAAAATTGTAAAAAAGGAGATTACATTAAAGAAAAG GATTATTCATCATTAAACTC
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MENADRHKELFEKISSFLEKEGATKVAVFGSYARGEEKPESDIDILVEFSETKGLLNLVRIERELSEFLGLKVDLLTEES ISPYLIDGIKREAKVL
Sequences:
>Translated_96_residues MENADRHKELFEKISSFLEKEGATKVAVFGSYARGEEKPESDIDILVEFSETKGLLNLVRIERELSEFLGLKVDLLTEES ISPYLIDGIKREAKVL >Mature_96_residues MENADRHKELFEKISSFLEKEGATKVAVFGSYARGEEKPESDIDILVEFSETKGLLNLVRIERELSEFLGLKVDLLTEES ISPYLIDGIKREAKVL
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002934 [H]
Pfam domain/function: PF01909 NTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 10903; Mature: 10903
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENADRHKELFEKISSFLEKEGATKVAVFGSYARGEEKPESDIDILVEFSETKGLLNLVR CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHH IERELSEFLGLKVDLLTEESISPYLIDGIKREAKVL HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MENADRHKELFEKISSFLEKEGATKVAVFGSYARGEEKPESDIDILVEFSETKGLLNLVR CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHH IERELSEFLGLKVDLLTEESISPYLIDGIKREAKVL HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]