| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21228016
Identifier: 21228016
GI number: 21228016
Start: 2273206
End: 2274063
Strand: Direct
Name: 21228016
Synonym: MM_1914
Alternate gene names: NA
Gene position: 2273206-2274063 (Clockwise)
Preceding gene: 21228015
Following gene: 21228017
Centisome position: 55.49
GC content: 47.32
Gene sequence:
>858_bases ATGCCGCCTGAAATCATTCCAATTATTGAAGAACCTGCACTTACAGCCACGAACACGGAAACTTCTCTGGTTATTGCCGA TGTCCACCTGGGGATCGAATGGGACCTCTACAGGAGTGGAATCAATCTCCCCAGCCGGATGAAAGACCGGCTTGACCGGA TTCTGAGTTATATACAGTCAGTTTCCCCTGACCGGGTAGTGCTGCTCGGGGACATAAAACACAATGTTCCCCAGGTTTCC TGGCAGGAAAAAGATGAGATTCCGTGTTTTCTTGAAACGCTTGCAGAGCACGCACATGTGGACATTCTACCAGGAAACCA TGATGGGGGAATTGAATTTCTTTTCAGCGGGCAAAAGGATATAAAAGTTCATTCTGCAAAAGGAGCTGTCCTTGACGGGA TCGGGTATTTTCACGGGCATACCTGGCCTGCTCCAGAACTTCTGGCTGCTTCCCATGTTATTACCGCGCATAACCATCCC ACGGTACGTTTTACCGATTCCTTAGGATATTCCACAGTTGAACCTGCATGGATAAGGACGAAATTCAGGGCTGAAGTCCT GAAAGAACGCTTTGGGGACCTTAATTTTGAAAATGAAAATGTCTGGGCTGACCCTGAAGTCTTTATTATGCCTGCTTTCA ACGAACTGTGCGGAGGCGTGCCATTTAACGAATCTGCAAAAGAAGACCTTCTAGGTCCGATTTTTTCTTCAGGCGGAATA GAGCTTGAAAATGCTGAAGTGTATCTGCTGGACGGGACAAGGCTCGGGCAGATCCGGAATATCCGCAAGCTTGAGTATAC AAGGGTTAGAAGCAAGATCGGAAGCAAAAAGCGAAGGAACTCTGGTAAATCCGTATGA
Upstream 100 bases:
>100_bases ACATATCCTGTGCCTGAATCCCCTGGATCGTCCGGAACTTCTTATCAAAATTTTCTCAATATGCTATCACATTTTAAATG TCATCCCTCTGTGATTATTT
Downstream 100 bases:
>100_bases GCCGTGAATAAAAAGTCAGATATCCCGGCTACAGGTATGTCAACTGTTCTGTAGTGGGCAGCTCTGTATAAATATATTCT GGCTCGAAAAAACATCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase; ICC-Like Phosphoesterase; Rpa-Associated Phosphoesterase; Calcineurin Superfamily Metallophosphoesterase; Calcineurin Superfamily Phosphoesterase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MPPEIIPIIEEPALTATNTETSLVIADVHLGIEWDLYRSGINLPSRMKDRLDRILSYIQSVSPDRVVLLGDIKHNVPQVS WQEKDEIPCFLETLAEHAHVDILPGNHDGGIEFLFSGQKDIKVHSAKGAVLDGIGYFHGHTWPAPELLAASHVITAHNHP TVRFTDSLGYSTVEPAWIRTKFRAEVLKERFGDLNFENENVWADPEVFIMPAFNELCGGVPFNESAKEDLLGPIFSSGGI ELENAEVYLLDGTRLGQIRNIRKLEYTRVRSKIGSKKRRNSGKSV
Sequences:
>Translated_285_residues MPPEIIPIIEEPALTATNTETSLVIADVHLGIEWDLYRSGINLPSRMKDRLDRILSYIQSVSPDRVVLLGDIKHNVPQVS WQEKDEIPCFLETLAEHAHVDILPGNHDGGIEFLFSGQKDIKVHSAKGAVLDGIGYFHGHTWPAPELLAASHVITAHNHP TVRFTDSLGYSTVEPAWIRTKFRAEVLKERFGDLNFENENVWADPEVFIMPAFNELCGGVPFNESAKEDLLGPIFSSGGI ELENAEVYLLDGTRLGQIRNIRKLEYTRVRSKIGSKKRRNSGKSV >Mature_284_residues PPEIIPIIEEPALTATNTETSLVIADVHLGIEWDLYRSGINLPSRMKDRLDRILSYIQSVSPDRVVLLGDIKHNVPQVSW QEKDEIPCFLETLAEHAHVDILPGNHDGGIEFLFSGQKDIKVHSAKGAVLDGIGYFHGHTWPAPELLAASHVITAHNHPT VRFTDSLGYSTVEPAWIRTKFRAEVLKERFGDLNFENENVWADPEVFIMPAFNELCGGVPFNESAKEDLLGPIFSSGGIE LENAEVYLLDGTRLGQIRNIRKLEYTRVRSKIGSKKRRNSGKSV
Specific function: Unknown
COG id: COG1407
COG function: function code R; Predicted ICC-like phosphoesterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31885; Mature: 31753
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPEIIPIIEEPALTATNTETSLVIADVHLGIEWDLYRSGINLPSRMKDRLDRILSYIQS CCCCEEEEECCCCEEECCCCCEEEEEEEEECEEEEEHHCCCCCHHHHHHHHHHHHHHHHH VSPDRVVLLGDIKHNVPQVSWQEKDEIPCFLETLAEHAHVDILPGNHDGGIEFLFSGQKD CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCCCEEEEECCCCC IKVHSAKGAVLDGIGYFHGHTWPAPELLAASHVITAHNHPTVRFTDSLGYSTVEPAWIRT EEEECCCCCEEECCHHHCCCCCCCHHHHHHHEEEEECCCCEEEEECCCCCCCCCCHHHHH KFRAEVLKERFGDLNFENENVWADPEVFIMPAFNELCGGVPFNESAKEDLLGPIFSSGGI HHHHHHHHHHHCCCCCCCCCEECCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHCCCCE ELENAEVYLLDGTRLGQIRNIRKLEYTRVRSKIGSKKRRNSGKSV EEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure PPEIIPIIEEPALTATNTETSLVIADVHLGIEWDLYRSGINLPSRMKDRLDRILSYIQS CCCEEEEECCCCEEECCCCCEEEEEEEEECEEEEEHHCCCCCHHHHHHHHHHHHHHHHH VSPDRVVLLGDIKHNVPQVSWQEKDEIPCFLETLAEHAHVDILPGNHDGGIEFLFSGQKD CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCCCEEEEECCCCC IKVHSAKGAVLDGIGYFHGHTWPAPELLAASHVITAHNHPTVRFTDSLGYSTVEPAWIRT EEEECCCCCEEECCHHHCCCCCCCHHHHHHHEEEEECCCCEEEEECCCCCCCCCCHHHHH KFRAEVLKERFGDLNFENENVWADPEVFIMPAFNELCGGVPFNESAKEDLLGPIFSSGGI HHHHHHHHHHHCCCCCCCCCEECCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHCCCCE ELENAEVYLLDGTRLGQIRNIRKLEYTRVRSKIGSKKRRNSGKSV EEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA