Click here to switch to the map view.

The map label for this gene is 21227956

Identifier: 21227956

GI number: 21227956

Start: 2204860

End: 2205579

Strand: Direct

Name: 21227956

Synonym: MM_1854

Alternate gene names: NA

Gene position: 2204860-2205579 (Clockwise)

Preceding gene: 21227955

Following gene: 21227963

Centisome position: 53.83

GC content: 48.06

Gene sequence:

>720_bases
ATGAGCTTTCAGAGAATTGCATGGGGTATCACAGGTGCAGGTCATTTCCTTGACCGCAGTTATCAGGTTTTTAAAGAACT
TAAACTCAGGAACCCCGAACTTTCCGTAAACACATACGTTTCCAGGGCAGCCGAAGAAGTGCTCAGGATGTACGGGCTTG
AGCAAAAGCTTGTAAAAATCTCGGGAGGAGACTACCTTGAAGAGATTTTCCGGGAAAGCGAGCAGGGTTCAAGTTCCCCC
AAAGTAGGGCGTTTTGCTCTTGACAGGTATGACGCCCTTTTCGTTACGCCTGCAACTTCAAACACAGTCTCGAAAATCGC
TTATGGGATTGCCGATTCCCTTGTAACCAATGCTGTCTCCCAGGCTGTCAAAGGGAGAGTCCCGGTATTTGTCGTACCTG
TGGACATCGAAGGCTCGATTATATCCGAAATGCCTTACAACATTGACAGAAAGCAGTGCAAACACTGCGAAACATGCCCC
CCTCGGGAAAACTGCCCACATGAAGCAATCAGCGAGAAAAACGGCGTCACGGACCAGATAGACCTGCTTAAATGCAAAGG
CTGCGGGATCTGCAAAGAACTCTGCCCCTATAATGCTATAAAAGGTGGACCTGTTGAAGTCCTTGTCAGGGACGTGGACA
TGCGAAATGTTGAGATTGTAAAAAGCCTGCAGGGGATCACCGTACTTGAAAGTCCCGAAGCCATTCTGGAGCTTTTTTAA

Upstream 100 bases:

>100_bases
AAACTGATTTATGAAGCTCTCGGACTTTAATTTTTCTTTTACTTTCAGGATGTCTTCTTTTAGAAAATTATATCATCTCC
CTCAGGCATGATTCATTTTC

Downstream 100 bases:

>100_bases
ATCCGGAATTTTGGCTTACTTTTTTCTCCTTTTTTTCCCTTTTTCCCCTTTTCCCTTTTTCCTTTCTGGAAATATTATTT
TTCTGCATCAAGCGTCCAAG

Product: flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSFQRIAWGITGAGHFLDRSYQVFKELKLRNPELSVNTYVSRAAEEVLRMYGLEQKLVKISGGDYLEEIFRESEQGSSSP
KVGRFALDRYDALFVTPATSNTVSKIAYGIADSLVTNAVSQAVKGRVPVFVVPVDIEGSIISEMPYNIDRKQCKHCETCP
PRENCPHEAISEKNGVTDQIDLLKCKGCGICKELCPYNAIKGGPVEVLVRDVDMRNVEIVKSLQGITVLESPEAILELF

Sequences:

>Translated_239_residues
MSFQRIAWGITGAGHFLDRSYQVFKELKLRNPELSVNTYVSRAAEEVLRMYGLEQKLVKISGGDYLEEIFRESEQGSSSP
KVGRFALDRYDALFVTPATSNTVSKIAYGIADSLVTNAVSQAVKGRVPVFVVPVDIEGSIISEMPYNIDRKQCKHCETCP
PRENCPHEAISEKNGVTDQIDLLKCKGCGICKELCPYNAIKGGPVEVLVRDVDMRNVEIVKSLQGITVLESPEAILELF
>Mature_238_residues
SFQRIAWGITGAGHFLDRSYQVFKELKLRNPELSVNTYVSRAAEEVLRMYGLEQKLVKISGGDYLEEIFRESEQGSSSPK
VGRFALDRYDALFVTPATSNTVSKIAYGIADSLVTNAVSQAVKGRVPVFVVPVDIEGSIISEMPYNIDRKQCKHCETCPP
RENCPHEAISEKNGVTDQIDLLKCKGCGICKELCPYNAIKGGPVEVLVRDVDMRNVEIVKSLQGITVLESPEAILELF

Specific function: Unknown

COG id: COG1036

COG function: function code C; Archaeal flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014073
- InterPro:   IPR003382 [H]

Pfam domain/function: PF00037 Fer4; PF02441 Flavoprotein [H]

EC number: NA

Molecular weight: Translated: 26492; Mature: 26361

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQRIAWGITGAGHFLDRSYQVFKELKLRNPELSVNTYVSRAAEEVLRMYGLEQKLVKI
CCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEE
SGGDYLEEIFRESEQGSSSPKVGRFALDRYDALFVTPATSNTVSKIAYGIADSLVTNAVS
CCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
QAVKGRVPVFVVPVDIEGSIISEMPYNIDRKQCKHCETCPPRENCPHEAISEKNGVTDQI
HHHCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHH
DLLKCKGCGICKELCPYNAIKGGPVEVLVRDVDMRNVEIVKSLQGITVLESPEAILELF
HHEEECCCCHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEECCCHHHHHCC
>Mature Secondary Structure 
SFQRIAWGITGAGHFLDRSYQVFKELKLRNPELSVNTYVSRAAEEVLRMYGLEQKLVKI
CCCHHEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEE
SGGDYLEEIFRESEQGSSSPKVGRFALDRYDALFVTPATSNTVSKIAYGIADSLVTNAVS
CCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
QAVKGRVPVFVVPVDIEGSIISEMPYNIDRKQCKHCETCPPRENCPHEAISEKNGVTDQI
HHHCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHH
DLLKCKGCGICKELCPYNAIKGGPVEVLVRDVDMRNVEIVKSLQGITVLESPEAILELF
HHEEECCCCHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]