| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227941
Identifier: 21227941
GI number: 21227941
Start: 2190887
End: 2191681
Strand: Direct
Name: 21227941
Synonym: MM_1839
Alternate gene names: NA
Gene position: 2190887-2191681 (Clockwise)
Preceding gene: 21227934
Following gene: 21227942
Centisome position: 53.48
GC content: 37.61
Gene sequence:
>795_bases GTGCCTGTCTATGAAGGTGCAACATTCTACTATACTCAATACAGTCTTCTAGATAGTAAAAACGGAAATAAAAAGAAAGT TGTTGTAGATCTCGTTACATCAAATATCGAGTGTGCTGAAAATGTTTCTAACACCAGCAAAGATAAAGTAAAAACTGTTA AAGTAGAAACTGTTAACAGTGATGAAATCGAAGAAGCATGGAATTATTTAGAAGACCAAGTGGTAGAGGAAAGTGATGAG ATAGGAACAGTATCAAGTACAGAAAGTACTTACTCAACTCAAGCGGTTGGTTATTATAAAAAAATATCTGGTGTTCCTTA TTATCTCGCGCTTACTTATGGCTGCGCTCCAACTGCGGGTGGTATGGTTCTGGGGTATTGGGACGGGAATGGATATCCAA ACTTTCCAACTGGTAACACACTAATGTCGGAGTTAGCAACAGCGATGGGAACTTATAACTATAGTACATCCGTGTCCAAA ATTGATGATGGTATAAATACAGTTTGTGATAATCATGGATATTCGAACTTTAATTCTGTAAATGACTATACCTTGACTAA ATCTGAACTCATGTCAGAAATTAATACCACTAGACCATTTGTCTTGAGTATGCAAGGTGGCGGGGTTGGAAGCGGACATA CTGGTGCATATAAAAACCATTCTGTTACATGTGTAGGTTATGGTATCTCGGGTACAACTGTTTATGCTTACCTTCATGAT GGATGGGATTCAAGTGAACATTACATTACTTTTGGAAATTGGAACAGTTCAACAGCAACATGGGTGAGACCTTAA
Upstream 100 bases:
>100_bases AAAGGGGCAACTCCCAACTAAAATCTCTACAATGGTCGAGAAATCAGAAAACGAAGTAGAAAACTATGCAAACAAAAATA AACTGAATGTTGAGGAAAGT
Downstream 100 bases:
>100_bases TCACCCATTTATTTTTGAAAGAAGAGATAATTATGCCACTTAAAAAAATCAATATAAAACTAACATTCGTCTTATTGTTA ATTTTTTTTGCTTCAATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPVYEGATFYYTQYSLLDSKNGNKKKVVVDLVTSNIECAENVSNTSKDKVKTVKVETVNSDEIEEAWNYLEDQVVEESDE IGTVSSTESTYSTQAVGYYKKISGVPYYLALTYGCAPTAGGMVLGYWDGNGYPNFPTGNTLMSELATAMGTYNYSTSVSK IDDGINTVCDNHGYSNFNSVNDYTLTKSELMSEINTTRPFVLSMQGGGVGSGHTGAYKNHSVTCVGYGISGTTVYAYLHD GWDSSEHYITFGNWNSSTATWVRP
Sequences:
>Translated_264_residues MPVYEGATFYYTQYSLLDSKNGNKKKVVVDLVTSNIECAENVSNTSKDKVKTVKVETVNSDEIEEAWNYLEDQVVEESDE IGTVSSTESTYSTQAVGYYKKISGVPYYLALTYGCAPTAGGMVLGYWDGNGYPNFPTGNTLMSELATAMGTYNYSTSVSK IDDGINTVCDNHGYSNFNSVNDYTLTKSELMSEINTTRPFVLSMQGGGVGSGHTGAYKNHSVTCVGYGISGTTVYAYLHD GWDSSEHYITFGNWNSSTATWVRP >Mature_263_residues PVYEGATFYYTQYSLLDSKNGNKKKVVVDLVTSNIECAENVSNTSKDKVKTVKVETVNSDEIEEAWNYLEDQVVEESDEI GTVSSTESTYSTQAVGYYKKISGVPYYLALTYGCAPTAGGMVLGYWDGNGYPNFPTGNTLMSELATAMGTYNYSTSVSKI DDGINTVCDNHGYSNFNSVNDYTLTKSELMSEINTTRPFVLSMQGGGVGSGHTGAYKNHSVTCVGYGISGTTVYAYLHDG WDSSEHYITFGNWNSSTATWVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28850; Mature: 28719
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVYEGATFYYTQYSLLDSKNGNKKKVVVDLVTSNIECAENVSNTSKDKVKTVKVETVNS CCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHCCCCCCCCEEEEEEEECCC DEIEEAWNYLEDQVVEESDEIGTVSSTESTYSTQAVGYYKKISGVPYYLALTYGCAPTAG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCC GMVLGYWDGNGYPNFPTGNTLMSELATAMGTYNYSTSVSKIDDGINTVCDNHGYSNFNSV CEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC NDYTLTKSELMSEINTTRPFVLSMQGGGVGSGHTGAYKNHSVTCVGYGISGTTVYAYLHD CCEEECHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEC GWDSSEHYITFGNWNSSTATWVRP CCCCCCCEEEECCCCCCCEEEECC >Mature Secondary Structure PVYEGATFYYTQYSLLDSKNGNKKKVVVDLVTSNIECAENVSNTSKDKVKTVKVETVNS CCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHCCCCCCCCEEEEEEEECCC DEIEEAWNYLEDQVVEESDEIGTVSSTESTYSTQAVGYYKKISGVPYYLALTYGCAPTAG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCC GMVLGYWDGNGYPNFPTGNTLMSELATAMGTYNYSTSVSKIDDGINTVCDNHGYSNFNSV CEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC NDYTLTKSELMSEINTTRPFVLSMQGGGVGSGHTGAYKNHSVTCVGYGISGTTVYAYLHD CCEEECHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEC GWDSSEHYITFGNWNSSTATWVRP CCCCCCCEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA