| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227852
Identifier: 21227852
GI number: 21227852
Start: 2091794
End: 2092897
Strand: Reverse
Name: 21227852
Synonym: MM_1750
Alternate gene names: NA
Gene position: 2092897-2091794 (Counterclockwise)
Preceding gene: 21227870
Following gene: 21227834
Centisome position: 51.09
GC content: 45.92
Gene sequence:
>1104_bases ATGAAAAATATAAAAGAAAAGGGCTCACAGGCATTAAAAATTACAGCAACTGTCTTTATTCTGGCAGTTATATGCATGTC TTCTGCCGCTTCTGCAGCAAACCTGCATGTAGACCCTGAAGCAGAAGAAGGCTATACTACAATTCAGGCTGCCGTAGATG CTGCAAATGCAGGGGACACTATATTTGTAAGCCCGGGAACTTATGTTGAAAACCTCAAAATAGACAAACAGGTAAGAATC TGGTCTGACTCGAGAAACCCTGAAAATACGATTGTAAGGCCGTCTGACCCTGCAGAAAGTCCCGTAGAAATAACCGGGGA AAGGGTAACTTTCAGCGGTTTTGGGGTAGAGGACTCGGAAAAAGCAGGGATTTTACTGTCAGGAGCTACCAGCTGTTTTA TCAATAATAACAGAGCGCAAAATTCAAAATACGGGATTCTCCTGCAGGATGCAGAGAGTAATAACATAAACGGGAACGTA ATAACCCTGAACGAAGCAGGATTAAGGCTCGAAAGCTCCAGATCAAACACTATTCAGGACAACCTTATTGCTTATAACTA CGGGCCAGGAATCTCCCTTGAGGAAAGCAGCAGGAACATTTTCTTTAATAACTATTTTAAAAACGCCGAAAACATTGAAG AGAACGCCGCAAATGCAGACAACACCTGGCAGAGCACCCTGACAGTCAAAAGAAACCTTATAAGGGGGCCCTATATAGGC GGGAACTTCTGGGCAGACATTGAAGGCACAGGTTACAGCGAGACCTGCGAGGATAAAAACAGCAATGGGATATGTGACGC CTCATACACGTTAAATGGAGGCGGGTCCGATAACTCTCCGCTTTTCCCTAAAGTTCCCAGCGCTGTCACTGCCCTTGAAA ACAAACTGGATGCCGAAGCTTATGAACTGGGCATGGAAACCAGAGGCGTGGAAGTAAATGAGACTGAAAACCCCGCGGGC GAGCAGACAGGAGAAAACGGACCAGAAGGGGAAGAAAATAAAACTGCTGAAACAGAAGCTTCTGAAAACGGCACCCCGGC ACCGGGAATCGGGTTTGCAATAATGGCAGCCGGAGCGGCTTATTTCCTGAAGAGGAGAAAGTAA
Upstream 100 bases:
>100_bases AAAGGATGAAATGAGAAAAATAGAAGATTAAAGGCTTTTAAAAAGATAAGATAAAACAAAGAGATTGTAAAGAAATGGAA GAGTAAAAGGGGAACTAAAT
Downstream 100 bases:
>100_bases CTGAAATAAAAGACAGGAAAAAAGAGATAGAAAGAAAAGAACGGGCAGTTTTCTGTCCGTTTTCTTTCCCTGATCATTTG TGAGCAAAGTACGCCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Surface Layer Protein B; Cell Surface Glycoprotein; Cell Surfacr Protein; Protein Kinase; TPR Repeat-Containing Protein; Parallel Beta-Helix Repeat-Containing Protein; Surface Layer Protein
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDTIFVSPGTYVENLKIDKQVRI WSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSEKAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNV ITLNEAGLRLESSRSNTIQDNLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEAYELGMETRGVEVNETENPAG EQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAAYFLKRRK
Sequences:
>Translated_367_residues MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDTIFVSPGTYVENLKIDKQVRI WSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSEKAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNV ITLNEAGLRLESSRSNTIQDNLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEAYELGMETRGVEVNETENPAG EQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAAYFLKRRK >Mature_367_residues MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDTIFVSPGTYVENLKIDKQVRI WSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSEKAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNV ITLNEAGLRLESSRSNTIQDNLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEAYELGMETRGVEVNETENPAG EQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAAYFLKRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39326; Mature: 39326
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDT CCCHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCE IFVSPGTYVENLKIDKQVRIWSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSE EEECCCCEEECEEECCEEEEECCCCCCCCCEECCCCCCCCCEEECCCEEEEEECCCCCCC KAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNVITLNEAGLRLESSRSNTIQD CCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCC NLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG CEEEEECCCCCEEECCCCEEEEEHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEA CCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHH YELGMETRGVEVNETENPAGEQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAA HHHCCHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YFLKRRK HHHCCCC >Mature Secondary Structure MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDT CCCHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCE IFVSPGTYVENLKIDKQVRIWSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSE EEECCCCEEECEEECCEEEEECCCCCCCCCEECCCCCCCCCEEECCCEEEEEECCCCCCC KAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNVITLNEAGLRLESSRSNTIQD CCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCC NLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG CEEEEECCCCCEEECCCCEEEEEHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEA CCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHH YELGMETRGVEVNETENPAGEQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAA HHHCCHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YFLKRRK HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA