Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227852

Identifier: 21227852

GI number: 21227852

Start: 2091794

End: 2092897

Strand: Reverse

Name: 21227852

Synonym: MM_1750

Alternate gene names: NA

Gene position: 2092897-2091794 (Counterclockwise)

Preceding gene: 21227870

Following gene: 21227834

Centisome position: 51.09

GC content: 45.92

Gene sequence:

>1104_bases
ATGAAAAATATAAAAGAAAAGGGCTCACAGGCATTAAAAATTACAGCAACTGTCTTTATTCTGGCAGTTATATGCATGTC
TTCTGCCGCTTCTGCAGCAAACCTGCATGTAGACCCTGAAGCAGAAGAAGGCTATACTACAATTCAGGCTGCCGTAGATG
CTGCAAATGCAGGGGACACTATATTTGTAAGCCCGGGAACTTATGTTGAAAACCTCAAAATAGACAAACAGGTAAGAATC
TGGTCTGACTCGAGAAACCCTGAAAATACGATTGTAAGGCCGTCTGACCCTGCAGAAAGTCCCGTAGAAATAACCGGGGA
AAGGGTAACTTTCAGCGGTTTTGGGGTAGAGGACTCGGAAAAAGCAGGGATTTTACTGTCAGGAGCTACCAGCTGTTTTA
TCAATAATAACAGAGCGCAAAATTCAAAATACGGGATTCTCCTGCAGGATGCAGAGAGTAATAACATAAACGGGAACGTA
ATAACCCTGAACGAAGCAGGATTAAGGCTCGAAAGCTCCAGATCAAACACTATTCAGGACAACCTTATTGCTTATAACTA
CGGGCCAGGAATCTCCCTTGAGGAAAGCAGCAGGAACATTTTCTTTAATAACTATTTTAAAAACGCCGAAAACATTGAAG
AGAACGCCGCAAATGCAGACAACACCTGGCAGAGCACCCTGACAGTCAAAAGAAACCTTATAAGGGGGCCCTATATAGGC
GGGAACTTCTGGGCAGACATTGAAGGCACAGGTTACAGCGAGACCTGCGAGGATAAAAACAGCAATGGGATATGTGACGC
CTCATACACGTTAAATGGAGGCGGGTCCGATAACTCTCCGCTTTTCCCTAAAGTTCCCAGCGCTGTCACTGCCCTTGAAA
ACAAACTGGATGCCGAAGCTTATGAACTGGGCATGGAAACCAGAGGCGTGGAAGTAAATGAGACTGAAAACCCCGCGGGC
GAGCAGACAGGAGAAAACGGACCAGAAGGGGAAGAAAATAAAACTGCTGAAACAGAAGCTTCTGAAAACGGCACCCCGGC
ACCGGGAATCGGGTTTGCAATAATGGCAGCCGGAGCGGCTTATTTCCTGAAGAGGAGAAAGTAA

Upstream 100 bases:

>100_bases
AAAGGATGAAATGAGAAAAATAGAAGATTAAAGGCTTTTAAAAAGATAAGATAAAACAAAGAGATTGTAAAGAAATGGAA
GAGTAAAAGGGGAACTAAAT

Downstream 100 bases:

>100_bases
CTGAAATAAAAGACAGGAAAAAAGAGATAGAAAGAAAAGAACGGGCAGTTTTCTGTCCGTTTTCTTTCCCTGATCATTTG
TGAGCAAAGTACGCCACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Surface Layer Protein B; Cell Surface Glycoprotein; Cell Surfacr Protein; Protein Kinase; TPR Repeat-Containing Protein; Parallel Beta-Helix Repeat-Containing Protein; Surface Layer Protein

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDTIFVSPGTYVENLKIDKQVRI
WSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSEKAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNV
ITLNEAGLRLESSRSNTIQDNLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG
GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEAYELGMETRGVEVNETENPAG
EQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAAYFLKRRK

Sequences:

>Translated_367_residues
MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDTIFVSPGTYVENLKIDKQVRI
WSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSEKAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNV
ITLNEAGLRLESSRSNTIQDNLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG
GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEAYELGMETRGVEVNETENPAG
EQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAAYFLKRRK
>Mature_367_residues
MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDTIFVSPGTYVENLKIDKQVRI
WSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSEKAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNV
ITLNEAGLRLESSRSNTIQDNLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG
GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEAYELGMETRGVEVNETENPAG
EQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAAYFLKRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39326; Mature: 39326

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDT
CCCHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCE
IFVSPGTYVENLKIDKQVRIWSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSE
EEECCCCEEECEEECCEEEEECCCCCCCCCEECCCCCCCCCEEECCCEEEEEECCCCCCC
KAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNVITLNEAGLRLESSRSNTIQD
CCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCC
NLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG
CEEEEECCCCCEEECCCCEEEEEHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEA
CCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHH
YELGMETRGVEVNETENPAGEQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAA
HHHCCHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YFLKRRK
HHHCCCC
>Mature Secondary Structure
MKNIKEKGSQALKITATVFILAVICMSSAASAANLHVDPEAEEGYTTIQAAVDAANAGDT
CCCHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCE
IFVSPGTYVENLKIDKQVRIWSDSRNPENTIVRPSDPAESPVEITGERVTFSGFGVEDSE
EEECCCCEEECEEECCEEEEECCCCCCCCCEECCCCCCCCCEEECCCEEEEEECCCCCCC
KAGILLSGATSCFINNNRAQNSKYGILLQDAESNNINGNVITLNEAGLRLESSRSNTIQD
CCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCC
NLIAYNYGPGISLEESSRNIFFNNYFKNAENIEENAANADNTWQSTLTVKRNLIRGPYIG
CEEEEECCCCCEEECCCCEEEEEHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
GNFWADIEGTGYSETCEDKNSNGICDASYTLNGGGSDNSPLFPKVPSAVTALENKLDAEA
CCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHH
YELGMETRGVEVNETENPAGEQTGENGPEGEENKTAETEASENGTPAPGIGFAIMAAGAA
HHHCCHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YFLKRRK
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA