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The map label for this gene is cbiD [H]

Identifier: 21227783

GI number: 21227783

Start: 2018546

End: 2019565

Strand: Reverse

Name: cbiD [H]

Synonym: MM_1681

Alternate gene names: 21227783

Gene position: 2019565-2018546 (Counterclockwise)

Preceding gene: 21227784

Following gene: 21227782

Centisome position: 49.3

GC content: 49.9

Gene sequence:

>1020_bases
ATGATAGATCCTGTTAACAATTTCAAGATCCCTGAAGAATGGATTGCCCTTACAGGGCTGCCCAGGGAAGAGCTTGAAAA
AAACGTGGCATCCGGTATGGTCGTGGTCCTGAGCGACGGTTCAGTACTTAAAAGAGGATACACCACAGGAACCACTGCCA
GCGCTGCTGCAAAAGCAGCTGTCCTTTCCCTTAAGAAAAAGATTGACAGCGTATCCGTTCCCACCCCTGTCGGACTGAGA
GCCCACCTTGAAGTCAGTGAGTCTTCCCCCGGGCGAGCAGTTGTAAAGAAGATCCTTAACGACCATGAATCCGATATTAC
ACGTGGGCTTGAATTTGTTGGAGAAGCCAGGGAAGCCGAGGGGATTCACGTCCTCGGAGGAAAAGGCATAGGAGTCGTAA
GAAGAGACGGCCTCCAGGTCCCGAAAGGAAAGCCAGCTATAAATCCGAAACCCATGGAACAGATAAGAGCAGCAGTAAAA
GAAGCTGTAGAGGAACTGGGCCTGCAGGGAGCCGAAGTTACGATTTCAATTCCTGAGGGAGAACGGATAGGAAAAGAAAC
CCTGAACAGCAGGATAGGAGTCGAAGGCGGAATTTCTGTCCTCGGAAGCACAGGTTTTGTTGAACCCTGGAATGACCACC
TAGGAGAAACGAGAGGAGACCTGATACGCTGCACGGACAAAGTTGTTCTGACCACAGGCAGGATAGGAATGCGGTATTCT
CACATGCTTTTCCCTGAATATACGGTTGTTATGGTAGGGAGCAGGATCTCGGAAGGTCTCGATTATGCATCAGGCGACAT
CATTATTTGCGGGCTGCCAGGCCTTGTCCTTAAATGGGGAAACCCTGAGATGCTTGAGGGCAGCGGGTATGCGACCGTTG
TTGAGATGCTTGAAAAGGCTCCGCAACACGAGCGCCTGAAAGAAGCTTTTGAAATGGCAGTCGAGAAAGGAAAAGGTGCA
AGAATCGTTGTAATTGACAGGGACGGGTCCGTCCTTATGGACAGTAAAAGTGAAAGTTAA

Upstream 100 bases:

>100_bases
TTTCGGGAATAAGTTGTCTCAGTCGAACTTCTTTCTTCTAATTCTTATCCGGTTTTTCAGGTCAATACATTTATAATAAA
AAACCTCCGAGTATTCTTCC

Downstream 100 bases:

>100_bases
TGCTAAATGTTAAAATACAAGGCAGGTAAAGGAGAAAAAGCCATGATAGTAGTAGGAGTTGGGGTCGGACCCGGCATGCT
TACGGAAGAAGGAATAAGGG

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MIDPVNNFKIPEEWIALTGLPREELEKNVASGMVVVLSDGSVLKRGYTTGTTASAAAKAAVLSLKKKIDSVSVPTPVGLR
AHLEVSESSPGRAVVKKILNDHESDITRGLEFVGEAREAEGIHVLGGKGIGVVRRDGLQVPKGKPAINPKPMEQIRAAVK
EAVEELGLQGAEVTISIPEGERIGKETLNSRIGVEGGISVLGSTGFVEPWNDHLGETRGDLIRCTDKVVLTTGRIGMRYS
HMLFPEYTVVMVGSRISEGLDYASGDIIICGLPGLVLKWGNPEMLEGSGYATVVEMLEKAPQHERLKEAFEMAVEKGKGA
RIVVIDRDGSVLMDSKSES

Sequences:

>Translated_339_residues
MIDPVNNFKIPEEWIALTGLPREELEKNVASGMVVVLSDGSVLKRGYTTGTTASAAAKAAVLSLKKKIDSVSVPTPVGLR
AHLEVSESSPGRAVVKKILNDHESDITRGLEFVGEAREAEGIHVLGGKGIGVVRRDGLQVPKGKPAINPKPMEQIRAAVK
EAVEELGLQGAEVTISIPEGERIGKETLNSRIGVEGGISVLGSTGFVEPWNDHLGETRGDLIRCTDKVVLTTGRIGMRYS
HMLFPEYTVVMVGSRISEGLDYASGDIIICGLPGLVLKWGNPEMLEGSGYATVVEMLEKAPQHERLKEAFEMAVEKGKGA
RIVVIDRDGSVLMDSKSES
>Mature_339_residues
MIDPVNNFKIPEEWIALTGLPREELEKNVASGMVVVLSDGSVLKRGYTTGTTASAAAKAAVLSLKKKIDSVSVPTPVGLR
AHLEVSESSPGRAVVKKILNDHESDITRGLEFVGEAREAEGIHVLGGKGIGVVRRDGLQVPKGKPAINPKPMEQIRAAVK
EAVEELGLQGAEVTISIPEGERIGKETLNSRIGVEGGISVLGSTGFVEPWNDHLGETRGDLIRCTDKVVLTTGRIGMRYS
HMLFPEYTVVMVGSRISEGLDYASGDIIICGLPGLVLKWGNPEMLEGSGYATVVEMLEKAPQHERLKEAFEMAVEKGKGA
RIVVIDRDGSVLMDSKSES

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 36315; Mature: 36315

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPVNNFKIPEEWIALTGLPREELEKNVASGMVVVLSDGSVLKRGYTTGTTASAAAKAA
CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCEEEEEECCCEEECCCCCCCCHHHHHHHH
VLSLKKKIDSVSVPTPVGLRAHLEVSESSPGRAVVKKILNDHESDITRGLEFVGEAREAE
HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCHHCCC
GIHVLGGKGIGVVRRDGLQVPKGKPAINPKPMEQIRAAVKEAVEELGLQGAEVTISIPEG
CEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
ERIGKETLNSRIGVEGGISVLGSTGFVEPWNDHLGETRGDLIRCTDKVVLTTGRIGMRYS
HHHHHHHHHHHCCCCCCHHEECCCCCCCCCHHHCCCCCCCEEEECCEEEEEECCCCCEEH
HMLFPEYTVVMVGSRISEGLDYASGDIIICGLPGLVLKWGNPEMLEGSGYATVVEMLEKA
HHCCCCEEEEEECCHHHHCCCCCCCCEEEEECCCEEEECCCCCEECCCCHHHHHHHHHHC
PQHERLKEAFEMAVEKGKGARIVVIDRDGSVLMDSKSES
CHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCC
>Mature Secondary Structure
MIDPVNNFKIPEEWIALTGLPREELEKNVASGMVVVLSDGSVLKRGYTTGTTASAAAKAA
CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCEEEEEECCCEEECCCCCCCCHHHHHHHH
VLSLKKKIDSVSVPTPVGLRAHLEVSESSPGRAVVKKILNDHESDITRGLEFVGEAREAE
HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCHHCCC
GIHVLGGKGIGVVRRDGLQVPKGKPAINPKPMEQIRAAVKEAVEELGLQGAEVTISIPEG
CEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
ERIGKETLNSRIGVEGGISVLGSTGFVEPWNDHLGETRGDLIRCTDKVVLTTGRIGMRYS
HHHHHHHHHHHCCCCCCHHEECCCCCCCCCHHHCCCCCCCEEEECCEEEEEECCCCCEEH
HMLFPEYTVVMVGSRISEGLDYASGDIIICGLPGLVLKWGNPEMLEGSGYATVVEMLEKA
HHCCCCEEEEEECCHHHHCCCCCCCCEEEEECCCEEEECCCCCEECCCCHHHHHHHHHHC
PQHERLKEAFEMAVEKGKGARIVVIDRDGSVLMDSKSES
CHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]