| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227759
Identifier: 21227759
GI number: 21227759
Start: 1980050
End: 1981249
Strand: Direct
Name: 21227759
Synonym: MM_1657
Alternate gene names: NA
Gene position: 1980050-1981249 (Clockwise)
Preceding gene: 21227753
Following gene: 21227760
Centisome position: 48.34
GC content: 43.25
Gene sequence:
>1200_bases ATGAGGTACCTTGTATTTTTGAGGGGGATACCCGGATCCGGCAAATCGACTTTTGTTAAAGAAGAAGGGCTTGAACCTTA CACTATTTCCTCGGACACAGTCCGGCTTCTTATAAAACCCCCGGTACTTTCCGTTGCCGGACAACCAGTTACTTCCCAGA AAATCAACCGCAGGGTATGGGGGCTTATTTATTCGCTTATTAAATGCCGCATGGAAGAGGGTGAATTTACAGTCCTTGAT GCAACCAATGCAGGAAATGCTGACATAGCAAAGTACAGGTCTCCTGTTAAAGCTTACAGGTATGAAGCTTTTTGCGTTGA TTTTTCTGATGTGTCTACTGAACTTGCAAAGGAAAGAAACATGGGAAGGCCTGCATATGAGATCGTACCTGAGACTGTAA TAGAAGAGATGTATGCTATAATCAAAAGGCAGAGCGTACCTTCATTTGTTACGGTAATAAAGCCTCATGAATTCCGCAAA AGGCTGCAGTATAATACTCCTGATTTCTCTAACTATAAAAAAATTCACCACATCGGGGATATAAACGGCAGTTATACAGC CCTGATGAAATACCTTTCATGCGGACTGGGCGACAATGACCTGTATATCTTTCTTGGAGATTATGCAGGCAGGGGAAATG AAAATTCCAGAGTCGTTAAGTTCCTTGTCTCAATCATGTGCAGGGATAATGTGGTTCTGCTTGAAGGAGATAATGAAAAA CGCCTTTGCCGCCCTGCAGCCGGTGAGAAGCAGACGCGGATAGAAGATTTTTCTGATACCACAGGTATTCTGAAAGAACT TGAAAGAGAAGGGGCTTTGCAGGATGCCCTTAAACTATGCGGGAAAACAGTGCCCTGCGTTTACTATAAGTTCCATGACA AATCCGTGCTTGTAACTCACGGAGGCCTGAGCAGCCTTCCTGAAAACCTGATTTTTATGGGTGCTGAACAGATGATTAAC GGCGTGGGAGAGCCTGAAGACGTTTTCCTGGTCGCTGAACATTTCAACAAAAATACGAATGAGAATACCTATCAGGTGCA TGGTCACAGGAACCCTGAAAATCTCCCGGTAAAAAACGGCAGAACGTTTAATTTATCCGATGAAAGCAGAAAAGGAAGTT TTCTCAGAACTCTGACGCTCGACAGAGAAGGGTTTGACTGGCAGTGTATCCGGAAAAAAAATAGTTTTATACAATTATAA
Upstream 100 bases:
>100_bases AGAACCGGTTAAAACAGGAAGAGCTGGTCAACACAAAAATACTGGTCAAAATACAGGATTGATCAAATAAGCAGAATTTA AGAAAAGTGAGGGATGTCAT
Downstream 100 bases:
>100_bases TTTTTATGTAGTAATTCTAAATTAACTGTCTAATGATAAAACAGGGATCAGTTTGCATAATATATAGATAATGAGTATGA GTACGCAGATCCCCAGTAGC
Product: putative serine/threonine protein phosphatase
Products: NA
Alternate protein names: Phosphoprotein Phosphatase; Metallophosphoesterase; 2 3-Cyclic Nucleotide 3-Phosphodiesterase; Serine/Threonine Protein Phosphatase; Phosphatase; Ser/Thr Protein Phosphatase Family Protein; Kinase; 2 3-Cyclic Nucleotide; 2 3'-Cyclic Nucleotide
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRYLVFLRGIPGSGKSTFVKEEGLEPYTISSDTVRLLIKPPVLSVAGQPVTSQKINRRVWGLIYSLIKCRMEEGEFTVLD ATNAGNADIAKYRSPVKAYRYEAFCVDFSDVSTELAKERNMGRPAYEIVPETVIEEMYAIIKRQSVPSFVTVIKPHEFRK RLQYNTPDFSNYKKIHHIGDINGSYTALMKYLSCGLGDNDLYIFLGDYAGRGNENSRVVKFLVSIMCRDNVVLLEGDNEK RLCRPAAGEKQTRIEDFSDTTGILKELEREGALQDALKLCGKTVPCVYYKFHDKSVLVTHGGLSSLPENLIFMGAEQMIN GVGEPEDVFLVAEHFNKNTNENTYQVHGHRNPENLPVKNGRTFNLSDESRKGSFLRTLTLDREGFDWQCIRKKNSFIQL
Sequences:
>Translated_399_residues MRYLVFLRGIPGSGKSTFVKEEGLEPYTISSDTVRLLIKPPVLSVAGQPVTSQKINRRVWGLIYSLIKCRMEEGEFTVLD ATNAGNADIAKYRSPVKAYRYEAFCVDFSDVSTELAKERNMGRPAYEIVPETVIEEMYAIIKRQSVPSFVTVIKPHEFRK RLQYNTPDFSNYKKIHHIGDINGSYTALMKYLSCGLGDNDLYIFLGDYAGRGNENSRVVKFLVSIMCRDNVVLLEGDNEK RLCRPAAGEKQTRIEDFSDTTGILKELEREGALQDALKLCGKTVPCVYYKFHDKSVLVTHGGLSSLPENLIFMGAEQMIN GVGEPEDVFLVAEHFNKNTNENTYQVHGHRNPENLPVKNGRTFNLSDESRKGSFLRTLTLDREGFDWQCIRKKNSFIQL >Mature_399_residues MRYLVFLRGIPGSGKSTFVKEEGLEPYTISSDTVRLLIKPPVLSVAGQPVTSQKINRRVWGLIYSLIKCRMEEGEFTVLD ATNAGNADIAKYRSPVKAYRYEAFCVDFSDVSTELAKERNMGRPAYEIVPETVIEEMYAIIKRQSVPSFVTVIKPHEFRK RLQYNTPDFSNYKKIHHIGDINGSYTALMKYLSCGLGDNDLYIFLGDYAGRGNENSRVVKFLVSIMCRDNVVLLEGDNEK RLCRPAAGEKQTRIEDFSDTTGILKELEREGALQDALKLCGKTVPCVYYKFHDKSVLVTHGGLSSLPENLIFMGAEQMIN GVGEPEDVFLVAEHFNKNTNENTYQVHGHRNPENLPVKNGRTFNLSDESRKGSFLRTLTLDREGFDWQCIRKKNSFIQL
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45257; Mature: 45257
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLVFLRGIPGSGKSTFVKEEGLEPYTISSDTVRLLIKPPVLSVAGQPVTSQKINRRVW CEEEEEEECCCCCCCCCEEHHCCCCCEEECCCCEEEEEECCHHHCCCCCCHHHHHHHHHH GLIYSLIKCRMEEGEFTVLDATNAGNADIAKYRSPVKAYRYEAFCVDFSDVSTELAKERN HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCHHHHHEEEEEEEEHHHHHHHHHHHHC MGRPAYEIVPETVIEEMYAIIKRQSVPSFVTVIKPHEFRKRLQYNTPDFSNYKKIHHIGD CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHCCCC INGSYTALMKYLSCGLGDNDLYIFLGDYAGRGNENSRVVKFLVSIMCRDNVVLLEGDNEK CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC RLCRPAAGEKQTRIEDFSDTTGILKELEREGALQDALKLCGKTVPCVYYKFHDKSVLVTH CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCEEEEEC GGLSSLPENLIFMGAEQMINGVGEPEDVFLVAEHFNKNTNENTYQVHGHRNPENLPVKNG CCHHHCCHHHHHCCHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCC RTFNLSDESRKGSFLRTLTLDREGFDWQCIRKKNSFIQL CEECCCCCCCCCCEEEEEEECCCCCCHHEEECCCCCCCC >Mature Secondary Structure MRYLVFLRGIPGSGKSTFVKEEGLEPYTISSDTVRLLIKPPVLSVAGQPVTSQKINRRVW CEEEEEEECCCCCCCCCEEHHCCCCCEEECCCCEEEEEECCHHHCCCCCCHHHHHHHHHH GLIYSLIKCRMEEGEFTVLDATNAGNADIAKYRSPVKAYRYEAFCVDFSDVSTELAKERN HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCHHHHHEEEEEEEEHHHHHHHHHHHHC MGRPAYEIVPETVIEEMYAIIKRQSVPSFVTVIKPHEFRKRLQYNTPDFSNYKKIHHIGD CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHCCCC INGSYTALMKYLSCGLGDNDLYIFLGDYAGRGNENSRVVKFLVSIMCRDNVVLLEGDNEK CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC RLCRPAAGEKQTRIEDFSDTTGILKELEREGALQDALKLCGKTVPCVYYKFHDKSVLVTH CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCEEEEEC GGLSSLPENLIFMGAEQMINGVGEPEDVFLVAEHFNKNTNENTYQVHGHRNPENLPVKNG CCHHHCCHHHHHCCHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCC RTFNLSDESRKGSFLRTLTLDREGFDWQCIRKKNSFIQL CEECCCCCCCCCCEEEEEEECCCCCCHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA