| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227666
Identifier: 21227666
GI number: 21227666
Start: 1863884
End: 1864486
Strand: Direct
Name: 21227666
Synonym: MM_1564
Alternate gene names: NA
Gene position: 1863884-1864486 (Clockwise)
Preceding gene: 21227665
Following gene: 21227667
Centisome position: 45.5
GC content: 47.93
Gene sequence:
>603_bases TTGCATAAGAATTCCGATCAAGAGAAACACAGCATGGAGACAATCCTGAAGCAGGTGAAAGACCCTGAGCTGCTTTCACA GATTGAAAAGGTCGTCCCTTTTCACGGCTTTCTGACATCAGGGGCATTAATCGGCATCCAGATGCTCAATATTGCAAGGA GGGAGCTTGATGTCCGGGACGGAGAGCGCATATACGTAACCTGTGAAACGAAAAGCTGCGTGCCTGACCCTTTCCAGATC CTTGCCGGAGCTACCATCGGGAACAATGGATTGAAAATCAATAACCTGGGAAAGATGGCTGTAACGGTGAACAAACAGGC ACCTGAAGGGATGAAGGGCATAATAGGCATCAGGATTTACCTTGACCCTGAAAAGACAAAGGACTACCCAAAACTTCATG CCTGGTACCTGAACACTGAAAAGCTACACCATGAAGAGGTTGTGCCTGTCCTTCTGGAAGCCGGGGATAATGTTTATTCC TGGAAAACCGTGGATCTGGAAGTCCCGGTCAGGAAGAAAAAGCGGATCCAGTGCTGCAAAAAATGTGGTGAGATGTTCGT TCAACATGATGATGAGCTGCTGTGCGGCGGATGCACAGAATAA
Upstream 100 bases:
>100_bases TGAATATCGCCTGTCTTTATTAAACTCACCTGTCTGTATTCAACATCTTTGGCGTTATGTTTATTTAAACATAACGATCA AATCTGCGGCGGTGTACCAA
Downstream 100 bases:
>100_bases CGTTGAGAGGTAAATAAAATGCAAAATGAGATGCGATTGTCAGTCTTTTCCGAAAAAAAAGACCGGCAGCTGGTCTATCA GCCTGAAAAATGCATTGGCT
Product: molybdenum-containing formylmethanofuran dehydrogenase isoenzyme I subunit E
Products: CO2; methanofuran; reduced acceptor
Alternate protein names: Formylmethanofuran Dehydrogenase Subunit E; Molybdenum Formylmethanofuran Dehydrogenase Subunit E
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MHKNSDQEKHSMETILKQVKDPELLSQIEKVVPFHGFLTSGALIGIQMLNIARRELDVRDGERIYVTCETKSCVPDPFQI LAGATIGNNGLKINNLGKMAVTVNKQAPEGMKGIIGIRIYLDPEKTKDYPKLHAWYLNTEKLHHEEVVPVLLEAGDNVYS WKTVDLEVPVRKKKRIQCCKKCGEMFVQHDDELLCGGCTE
Sequences:
>Translated_200_residues MHKNSDQEKHSMETILKQVKDPELLSQIEKVVPFHGFLTSGALIGIQMLNIARRELDVRDGERIYVTCETKSCVPDPFQI LAGATIGNNGLKINNLGKMAVTVNKQAPEGMKGIIGIRIYLDPEKTKDYPKLHAWYLNTEKLHHEEVVPVLLEAGDNVYS WKTVDLEVPVRKKKRIQCCKKCGEMFVQHDDELLCGGCTE >Mature_200_residues MHKNSDQEKHSMETILKQVKDPELLSQIEKVVPFHGFLTSGALIGIQMLNIARRELDVRDGERIYVTCETKSCVPDPFQI LAGATIGNNGLKINNLGKMAVTVNKQAPEGMKGIIGIRIYLDPEKTKDYPKLHAWYLNTEKLHHEEVVPVLLEAGDNVYS WKTVDLEVPVRKKKRIQCCKKCGEMFVQHDDELLCGGCTE
Specific function: Unknown
COG id: COG2191
COG function: function code C; Formylmethanofuran dehydrogenase subunit E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.2.99.5
Molecular weight: Translated: 22587; Mature: 22587
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKNSDQEKHSMETILKQVKDPELLSQIEKVVPFHGFLTSGALIGIQMLNIARRELDVRD CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCC GERIYVTCETKSCVPDPFQILAGATIGNNGLKINNLGKMAVTVNKQAPEGMKGIIGIRIY CCEEEEEECCCCCCCCHHHHHCCCEECCCCEEEECCCEEEEEEECCCCCCCCCEEEEEEE LDPEKTKDYPKLHAWYLNTEKLHHEEVVPVLLEAGDNVYSWKTVDLEVPVRKKKRIQCCK ECCCCCCCCCCEEEEEECHHHHCHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHH KCGEMFVQHDDELLCGGCTE HHHHHHHCCCCCEECCCCCC >Mature Secondary Structure MHKNSDQEKHSMETILKQVKDPELLSQIEKVVPFHGFLTSGALIGIQMLNIARRELDVRD CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCC GERIYVTCETKSCVPDPFQILAGATIGNNGLKINNLGKMAVTVNKQAPEGMKGIIGIRIY CCEEEEEECCCCCCCCHHHHHCCCEECCCCEEEECCCEEEEEEECCCCCCCCCEEEEEEE LDPEKTKDYPKLHAWYLNTEKLHHEEVVPVLLEAGDNVYSWKTVDLEVPVRKKKRIQCCK ECCCCCCCCCCEEEEEECHHHHCHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHH KCGEMFVQHDDELLCGGCTE HHHHHHHCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formylmethanofuran; H2O; acceptor
Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA