| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is glmM [H]
Identifier: 21227623
GI number: 21227623
Start: 1812789
End: 1814135
Strand: Direct
Name: glmM [H]
Synonym: MM_1521
Alternate gene names: 21227623
Gene position: 1812789-1814135 (Clockwise)
Preceding gene: 21227613
Following gene: 21227631
Centisome position: 44.25
GC content: 49.44
Gene sequence:
>1347_bases ATGGAATTATTCGGAACCAATGGTGTGCGCGGTATCGCCAACGAATTTATAACGCCTGAACTGGCGGTCAATGTGGCTAA AAGCCTTGGCACGTACATGGGCTCAAAAGGTACGGTTGCAATAGGCTGCGATACCAGGATTTCGGGCCAGATGCTGAAAT CCGCAGCAATTGCCGGAGCTCTTGCAACAGGCCTGAGCGTAATTGATGTGGGGACCGTCCCTACTCCTTCTATTCAATAC TACGTGCGCGACTATGCCGATGCCGGGATCGTTATCACTGCATCCCACAACCCGAGGGAATATAATGGAATTAAGCTGAT TGCAGGAGACGGCTCGGAATTCCCGAGGGATGGGGAAAGGGAAATCGAAAAAATCTATTTTTCAGGCAAATTCTCGATTG TTTCATGGGACAAAACCGGAAGTTTCAGATTCGATCCGTCGGTTAATGATTATTACATAAAAAATATCGTACGCGCGGTT AATGTCGAAGCTATCAGGAGCCGGAGGTTTAAGGTAGTGGTTGATACCGGCTGCGGGGCAGGTTCCCTTACCCTTCCCTT CCTGCTCAGGGAACTGGGGTGTGAAGTCCTTACTCTCGGGGCCCAGCCTGACGGGACTTTCCCCTGGAGAAACCCGGAGC CTACTCCTGATGCCCTGACAGAGCTCTCAGCTCTCGTTAAAAAGACAGGGGCAGCTTTTGGGGCAGCTCATGACGGGGAC GCAGACAGAATAGTCTTCATGGACGAGAACGGGGAGTTCGTAAATGAGGAAGTCCTGCTTGCAATGATGACGAAATACAT GCTTGAGCTTGAAAAAGGGCCTGTGGTCACTCCGGTAAGCTCTTCCCAGCGCATGGCTGATGTCACAAAGGAAGCAGGGG TTGAACTTTACTGGACTGCTGTGGGTTCAATAAATGTAGCCAGAAAAATGATGGAAACAGGCGCTGTTTTTGGCGGCGAG GGCAATGGAGGTCTTATCTTCCCCAAACATCAGTACTGCCGGGACGGAGCTATGGCATGTGCAAAAATCCTTGAAATCCT TGCCAGTGGAAAGAAGCTTTCCGAGCTAACTGAAAGCGTGCCTGTATATTTCAATGCAAAAACCAAGACTCCTTCCAGGG ATATTGTGGGCACTATGGGAAGAATCAGATATGAGACCTCAAGCATGGGCCTTAAAACAGATACTATTGACGGAGTCAAG ATCTGGTACGATGACGGATGGGTCCTTATACGCCCTTCAGGTACAGAGCCAATTTTCCGGATATTTGCCGAAGCGAAAAA GCAGGACAGAGCAGAGGAATTAATGAACCAGGGTTTGGAAACGGTTTTAAGGGCAGAAAAAGCCTGA
Upstream 100 bases:
>100_bases TTTTTCTATCAGGGCTCTGGTTATAATAATAAATCTAATTAGAACCTAATTTCCTTATAATAGTATAATTTTGACGCAAA TGACAAGATGGAGATCTTAA
Downstream 100 bases:
>100_bases AATTGCCTTAATGAGGCTCAAACTCTTTTGAGCCTTACTTTCTTTTTTAATTTTAAATCCTCAATTCAACAAATCTTCAA TTCAATAAATCCTCAATTCA
Product: phosphoglucomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MELFGTNGVRGIANEFITPELAVNVAKSLGTYMGSKGTVAIGCDTRISGQMLKSAAIAGALATGLSVIDVGTVPTPSIQY YVRDYADAGIVITASHNPREYNGIKLIAGDGSEFPRDGEREIEKIYFSGKFSIVSWDKTGSFRFDPSVNDYYIKNIVRAV NVEAIRSRRFKVVVDTGCGAGSLTLPFLLRELGCEVLTLGAQPDGTFPWRNPEPTPDALTELSALVKKTGAAFGAAHDGD ADRIVFMDENGEFVNEEVLLAMMTKYMLELEKGPVVTPVSSSQRMADVTKEAGVELYWTAVGSINVARKMMETGAVFGGE GNGGLIFPKHQYCRDGAMACAKILEILASGKKLSELTESVPVYFNAKTKTPSRDIVGTMGRIRYETSSMGLKTDTIDGVK IWYDDGWVLIRPSGTEPIFRIFAEAKKQDRAEELMNQGLETVLRAEKA
Sequences:
>Translated_448_residues MELFGTNGVRGIANEFITPELAVNVAKSLGTYMGSKGTVAIGCDTRISGQMLKSAAIAGALATGLSVIDVGTVPTPSIQY YVRDYADAGIVITASHNPREYNGIKLIAGDGSEFPRDGEREIEKIYFSGKFSIVSWDKTGSFRFDPSVNDYYIKNIVRAV NVEAIRSRRFKVVVDTGCGAGSLTLPFLLRELGCEVLTLGAQPDGTFPWRNPEPTPDALTELSALVKKTGAAFGAAHDGD ADRIVFMDENGEFVNEEVLLAMMTKYMLELEKGPVVTPVSSSQRMADVTKEAGVELYWTAVGSINVARKMMETGAVFGGE GNGGLIFPKHQYCRDGAMACAKILEILASGKKLSELTESVPVYFNAKTKTPSRDIVGTMGRIRYETSSMGLKTDTIDGVK IWYDDGWVLIRPSGTEPIFRIFAEAKKQDRAEELMNQGLETVLRAEKA >Mature_448_residues MELFGTNGVRGIANEFITPELAVNVAKSLGTYMGSKGTVAIGCDTRISGQMLKSAAIAGALATGLSVIDVGTVPTPSIQY YVRDYADAGIVITASHNPREYNGIKLIAGDGSEFPRDGEREIEKIYFSGKFSIVSWDKTGSFRFDPSVNDYYIKNIVRAV NVEAIRSRRFKVVVDTGCGAGSLTLPFLLRELGCEVLTLGAQPDGTFPWRNPEPTPDALTELSALVKKTGAAFGAAHDGD ADRIVFMDENGEFVNEEVLLAMMTKYMLELEKGPVVTPVSSSQRMADVTKEAGVELYWTAVGSINVARKMMETGAVFGGE GNGGLIFPKHQYCRDGAMACAKILEILASGKKLSELTESVPVYFNAKTKTPSRDIVGTMGRIRYETSSMGLKTDTIDGVK IWYDDGWVLIRPSGTEPIFRIFAEAKKQDRAEELMNQGLETVLRAEKA
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=455, Percent_Identity=26.8131868131868, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1789566, Length=441, Percent_Identity=30.6122448979592, Blast_Score=155, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 48629; Mature: 48629
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFGTNGVRGIANEFITPELAVNVAKSLGTYMGSKGTVAIGCDTRISGQMLKSAAIAGA CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH LATGLSVIDVGTVPTPSIQYYVRDYADAGIVITASHNPREYNGIKLIAGDGSEFPRDGER HHHCCEEEEECCCCCCCHHHHEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHH EIEKIYFSGKFSIVSWDKTGSFRFDPSVNDYYIKNIVRAVNVEAIRSRRFKVVVDTGCGA HHHEEEEECEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC GSLTLPFLLRELGCEVLTLGAQPDGTFPWRNPEPTPDALTELSALVKKTGAAFGAAHDGD CCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC ADRIVFMDENGEFVNEEVLLAMMTKYMLELEKGPVVTPVSSSQRMADVTKEAGVELYWTA CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCEEEEEE VGSINVARKMMETGAVFGGEGNGGLIFPKHQYCRDGAMACAKILEILASGKKLSELTESV ECCHHHHHHHHHHCCEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC PVYFNAKTKTPSRDIVGTMGRIRYETSSMGLKTDTIDGVKIWYDDGWVLIRPSGTEPIFR CEEEEECCCCCCHHHHHCHHHEEEECCCCCCEECCCCCEEEEEECCEEEEECCCCCHHHH IFAEAKKQDRAEELMNQGLETVLRAEKA HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELFGTNGVRGIANEFITPELAVNVAKSLGTYMGSKGTVAIGCDTRISGQMLKSAAIAGA CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH LATGLSVIDVGTVPTPSIQYYVRDYADAGIVITASHNPREYNGIKLIAGDGSEFPRDGER HHHCCEEEEECCCCCCCHHHHEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHH EIEKIYFSGKFSIVSWDKTGSFRFDPSVNDYYIKNIVRAVNVEAIRSRRFKVVVDTGCGA HHHEEEEECEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC GSLTLPFLLRELGCEVLTLGAQPDGTFPWRNPEPTPDALTELSALVKKTGAAFGAAHDGD CCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC ADRIVFMDENGEFVNEEVLLAMMTKYMLELEKGPVVTPVSSSQRMADVTKEAGVELYWTA CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCEEEEEE VGSINVARKMMETGAVFGGEGNGGLIFPKHQYCRDGAMACAKILEILASGKKLSELTESV ECCHHHHHHHHHHCCEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC PVYFNAKTKTPSRDIVGTMGRIRYETSSMGLKTDTIDGVKIWYDDGWVLIRPSGTEPIFR CEEEEECCCCCCHHHHHCHHHEEEECCCCCCEECCCCCEEEEEECCEEEEECCCCCHHHH IFAEAKKQDRAEELMNQGLETVLRAEKA HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA