Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227616

Identifier: 21227616

GI number: 21227616

Start: 1803192

End: 1804253

Strand: Reverse

Name: 21227616

Synonym: MM_1514

Alternate gene names: NA

Gene position: 1804253-1803192 (Counterclockwise)

Preceding gene: 21227617

Following gene: 21227615

Centisome position: 44.05

GC content: 40.87

Gene sequence:

>1062_bases
ATGCTAAAGACTTCAGGAAAAGGGCTAAAAAAAGAGGCTGCAGTTTCAGAAGTAATGGGCGTTGTACTCCTTACAGGTAT
AGTGGTCATCATGCTCAGCACCCTCGGCGCAACTGTTTTCTCGATGGAGGGCCCTGACGATGTCCCCCATACAAACGTCC
AGGAAATAATGGACATTTCCACGGATACGATCTACCTGAAAAACGGTGGGGGAGAACCGGTAAGCACTGAAAATTTAAGG
ATCTTAGTAAATATTAACGACAGGAAGTACGAATATCCATCCTCGAAAATTTACGAAAGCCTGGGAAACAGTAGCGTATG
GAAAATGGGGGATACTATTGAAATCAATTCAAAGGATACGTGGGGCGTTAACCTCAACAATAACGACAAAGTGGAGCTAT
TCCTGGTCGACACCCCCTCAAACGAATTGATCCAGAAAAGTACGCTTACGTGCGAGCTTCAAAAGAAGCCCGATTTAAGT
CTATGTTTCACTCCGATGGGAGATATAACGGATACATCAGAATCAGGAAAAGATTCATCAAAGAAAGGATATGGAGACAA
AAAACAGGTTCATTTTACAGATGCTGATGATAAAACGCTAAAGGAAAAAAACAATGAAAAAAGAAACTGCACAACTTATT
ACCCCCCTACAAATGTAATTAACACCAGTATATATCAAGAATTCGAATTCAAGATTAAGCCCGCTGCATGTGGATTAAGA
CCAGGAGACACTTTAGTAAATGCAACTCTGATAATTATTTATTATACACACGATAGCTCCGGAAAAGACTCCAAAGGTGT
GGCTATTAAACTCAAATATTATGACACTCTCGAGAACGGAAGTGGAGAATGGGTATACTCCGATACAGTTCTTCCTGCAC
ATAATAATAACTTCGAGCCTGAACTTGTCAACCTGACAGATCGCATCAATACTCCTGCTGATCTGGCTAATTTCAAAGTA
CGGATTGAAGCATCAACGGAAGCAGATAAGCACGCAGAGAAAGAATTAAACATCGATTACATAGGGTTATTGCTAGAAAG
AGCGAGCAACGAGAAAGAGTAA

Upstream 100 bases:

>100_bases
AAAAATGGGGCAGGGTTCGGTTTACATGGGACTGAAGTACAGCGTCAGCATGATGCTGATCACCTATGTTGTCTTTACAA
TGTTCGTCTAAGGTGTTTTT

Downstream 100 bases:

>100_bases
GATTATTAATGGAGTTTTGAGACCGGATTTAATCTAATCTTTAAAAAAATAATAATTGGTATTAAAAAATAGTGAAAAGT
AGGGGAGTGGAGAGACCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLKTSGKGLKKEAAVSEVMGVVLLTGIVVIMLSTLGATVFSMEGPDDVPHTNVQEIMDISTDTIYLKNGGGEPVSTENLR
ILVNINDRKYEYPSSKIYESLGNSSVWKMGDTIEINSKDTWGVNLNNNDKVELFLVDTPSNELIQKSTLTCELQKKPDLS
LCFTPMGDITDTSESGKDSSKKGYGDKKQVHFTDADDKTLKEKNNEKRNCTTYYPPTNVINTSIYQEFEFKIKPAACGLR
PGDTLVNATLIIIYYTHDSSGKDSKGVAIKLKYYDTLENGSGEWVYSDTVLPAHNNNFEPELVNLTDRINTPADLANFKV
RIEASTEADKHAEKELNIDYIGLLLERASNEKE

Sequences:

>Translated_353_residues
MLKTSGKGLKKEAAVSEVMGVVLLTGIVVIMLSTLGATVFSMEGPDDVPHTNVQEIMDISTDTIYLKNGGGEPVSTENLR
ILVNINDRKYEYPSSKIYESLGNSSVWKMGDTIEINSKDTWGVNLNNNDKVELFLVDTPSNELIQKSTLTCELQKKPDLS
LCFTPMGDITDTSESGKDSSKKGYGDKKQVHFTDADDKTLKEKNNEKRNCTTYYPPTNVINTSIYQEFEFKIKPAACGLR
PGDTLVNATLIIIYYTHDSSGKDSKGVAIKLKYYDTLENGSGEWVYSDTVLPAHNNNFEPELVNLTDRINTPADLANFKV
RIEASTEADKHAEKELNIDYIGLLLERASNEKE
>Mature_353_residues
MLKTSGKGLKKEAAVSEVMGVVLLTGIVVIMLSTLGATVFSMEGPDDVPHTNVQEIMDISTDTIYLKNGGGEPVSTENLR
ILVNINDRKYEYPSSKIYESLGNSSVWKMGDTIEINSKDTWGVNLNNNDKVELFLVDTPSNELIQKSTLTCELQKKPDLS
LCFTPMGDITDTSESGKDSSKKGYGDKKQVHFTDADDKTLKEKNNEKRNCTTYYPPTNVINTSIYQEFEFKIKPAACGLR
PGDTLVNATLIIIYYTHDSSGKDSKGVAIKLKYYDTLENGSGEWVYSDTVLPAHNNNFEPELVNLTDRINTPADLANFKV
RIEASTEADKHAEKELNIDYIGLLLERASNEKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39205; Mature: 39205

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTSGKGLKKEAAVSEVMGVVLLTGIVVIMLSTLGATVFSMEGPDDVPHTNVQEIMDIS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHCCC
TDTIYLKNGGGEPVSTENLRILVNINDRKYEYPSSKIYESLGNSSVWKMGDTIEINSKDT
CCEEEEECCCCCCCCCCCEEEEEEECCCEEECCHHHHHHHHCCCCEEECCCEEEECCCCE
WGVNLNNNDKVELFLVDTPSNELIQKSTLTCELQKKPDLSLCFTPMGDITDTSESGKDSS
EEEECCCCCEEEEEEEECCCHHHHHHCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCC
KKGYGDKKQVHFTDADDKTLKEKNNEKRNCTTYYPPTNVINTSIYQEFEFKIKPAACGLR
CCCCCCCEEEEEECCCCHHHHHCCCCCCCCEEECCCCCCEEHHHEEEEEEEECHHHCCCC
PGDTLVNATLIIIYYTHDSSGKDSKGVAIKLKYYDTLENGSGEWVYSDTVLPAHNNNFEP
CCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCEEEECEEEECCCCCCCC
ELVNLTDRINTPADLANFKVRIEASTEADKHAEKELNIDYIGLLLERASNEKE
EEEEHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKTSGKGLKKEAAVSEVMGVVLLTGIVVIMLSTLGATVFSMEGPDDVPHTNVQEIMDIS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHCCC
TDTIYLKNGGGEPVSTENLRILVNINDRKYEYPSSKIYESLGNSSVWKMGDTIEINSKDT
CCEEEEECCCCCCCCCCCEEEEEEECCCEEECCHHHHHHHHCCCCEEECCCEEEECCCCE
WGVNLNNNDKVELFLVDTPSNELIQKSTLTCELQKKPDLSLCFTPMGDITDTSESGKDSS
EEEECCCCCEEEEEEEECCCHHHHHHCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCC
KKGYGDKKQVHFTDADDKTLKEKNNEKRNCTTYYPPTNVINTSIYQEFEFKIKPAACGLR
CCCCCCCEEEEEECCCCHHHHHCCCCCCCCEEECCCCCCEEHHHEEEEEEEECHHHCCCC
PGDTLVNATLIIIYYTHDSSGKDSKGVAIKLKYYDTLENGSGEWVYSDTVLPAHNNNFEP
CCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCEEEECEEEECCCCCCCC
ELVNLTDRINTPADLANFKVRIEASTEADKHAEKELNIDYIGLLLERASNEKE
EEEEHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA