Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227614

Identifier: 21227614

GI number: 21227614

Start: 1801583

End: 1802521

Strand: Reverse

Name: 21227614

Synonym: MM_1512

Alternate gene names: NA

Gene position: 1802521-1801583 (Counterclockwise)

Preceding gene: 21227615

Following gene: 21227612

Centisome position: 44.0

GC content: 41.64

Gene sequence:

>939_bases
ATGAAAAAGCGATTCTTTGAATCAATCTCTTCTTTTTACAAATCCGAATCAGGGATAGCAGCTGCTGTTGCTGCGGCTCT
GCTTCTTGGAATTATAGTCGTTTCTATGACAACAATCCAGGTCCAGTACGTGCCTGTCTGGAAAGAAGACGCAGAATACG
CCCATATGTCCGACGTCTGGCAGGACATGTCCAGATTCAAGTCTAACGTAGATATTCTGGCTGCAGGAATAGAAATGAAC
CCGAATTCCAGGATAACCCTGAACAGCCCGATCCAGATGGGAGGGGCAGACGTGCCTTTCATAGGCGGCATGAAAACAGG
AGGAACCCTTACTGTAAACAATGCCATCTCAGGCATGTTGATAGAAGTAAATGATGATATGAGTGGATACGATAGCAATC
AAACTCTATCTGATATCGGCTCGGTTTCATACCGCCCTACAAATATCCATTCCGTGGAAGAAACTTATTGCTATGAAAAT
GGAGCGCTTATCGTCACCCAGAATGGCAGATCTGTAATGAAACTATTTCCAGGAATCGTGCTAGAAGATGGTGCAGGAAT
AGCTTCCGTAAACCTCTCGGCGAGGATAGCTACCCTTGAAGGAACAAGAGGTGTAATGGCCAGTAACAGTATGGAGAATA
TCAGGCTAACGTCTCAAGATTTTATAAACATATATGACTCTGACCAGGAATACACCAATGAAAATACAACTAAAAAAGCT
AACGTTACCTCCGTAGACCTTACGATCTACACGGAAAATACAGAAGCCTGGGAAAAGTATTTTGAAGATTCAGCCAACGA
GACTAACCTTCAGGAAGGAACGGATTATAACATAACTAAAGAAGATTATTCCGTGAAATTTTCCCTTTTCCCGGAAAACA
AAACCATCAATTTTAAAGCATACAATGCGATAATAAAAATGAAGACAGAAATTCAATAA

Upstream 100 bases:

>100_bases
GGATAGTTGCAGGAAATGCTGGTGAGAGAATTACAAATCTTAATGTTAGCTTCATGGTGTTGCATGTAAGTTAAGAAACT
AAATAAGGAAAGGGAAATAG

Downstream 100 bases:

>100_bases
AGTCTATCTTAGCCCCTTTCCTTACCAATTTTTTAAGACGTGCAGCCGCAAGAAAAATAGAGAAGATTTCGGAAAAATAA
ATTCTGTAAATTTTTCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVWQDMSRFKSNVDILAAGIEMN
PNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGMLIEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYEN
GALIVTQNGRSVMKLFPGIVLEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA
NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKAYNAIIKMKTEIQ

Sequences:

>Translated_312_residues
MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVWQDMSRFKSNVDILAAGIEMN
PNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGMLIEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYEN
GALIVTQNGRSVMKLFPGIVLEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA
NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKAYNAIIKMKTEIQ
>Mature_312_residues
MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVWQDMSRFKSNVDILAAGIEMN
PNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGMLIEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYEN
GALIVTQNGRSVMKLFPGIVLEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA
NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKAYNAIIKMKTEIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34493; Mature: 34493

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVW
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHH
QDMSRFKSNVDILAAGIEMNPNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGML
HHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCEECCCCCCCEEEECCCCCEEE
IEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYENGALIVTQNGRSVMKLFPGIV
EEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHEEEECCEEEEEECCCHHHHHCCCEE
LEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA
EECCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEECCCCEEEEECCCHHHCCCCCCCCC
NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKA
CEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCEEEEEE
YNAIIKMKTEIQ
EEEEEEEEECCC
>Mature Secondary Structure
MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVW
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHH
QDMSRFKSNVDILAAGIEMNPNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGML
HHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCEECCCCCCCEEEECCCCCEEE
IEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYENGALIVTQNGRSVMKLFPGIV
EEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHEEEECCEEEEEECCCHHHHHCCCEE
LEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA
EECCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEECCCCEEEEECCCHHHCCCCCCCCC
NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKA
CEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCEEEEEE
YNAIIKMKTEIQ
EEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA