| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227614
Identifier: 21227614
GI number: 21227614
Start: 1801583
End: 1802521
Strand: Reverse
Name: 21227614
Synonym: MM_1512
Alternate gene names: NA
Gene position: 1802521-1801583 (Counterclockwise)
Preceding gene: 21227615
Following gene: 21227612
Centisome position: 44.0
GC content: 41.64
Gene sequence:
>939_bases ATGAAAAAGCGATTCTTTGAATCAATCTCTTCTTTTTACAAATCCGAATCAGGGATAGCAGCTGCTGTTGCTGCGGCTCT GCTTCTTGGAATTATAGTCGTTTCTATGACAACAATCCAGGTCCAGTACGTGCCTGTCTGGAAAGAAGACGCAGAATACG CCCATATGTCCGACGTCTGGCAGGACATGTCCAGATTCAAGTCTAACGTAGATATTCTGGCTGCAGGAATAGAAATGAAC CCGAATTCCAGGATAACCCTGAACAGCCCGATCCAGATGGGAGGGGCAGACGTGCCTTTCATAGGCGGCATGAAAACAGG AGGAACCCTTACTGTAAACAATGCCATCTCAGGCATGTTGATAGAAGTAAATGATGATATGAGTGGATACGATAGCAATC AAACTCTATCTGATATCGGCTCGGTTTCATACCGCCCTACAAATATCCATTCCGTGGAAGAAACTTATTGCTATGAAAAT GGAGCGCTTATCGTCACCCAGAATGGCAGATCTGTAATGAAACTATTTCCAGGAATCGTGCTAGAAGATGGTGCAGGAAT AGCTTCCGTAAACCTCTCGGCGAGGATAGCTACCCTTGAAGGAACAAGAGGTGTAATGGCCAGTAACAGTATGGAGAATA TCAGGCTAACGTCTCAAGATTTTATAAACATATATGACTCTGACCAGGAATACACCAATGAAAATACAACTAAAAAAGCT AACGTTACCTCCGTAGACCTTACGATCTACACGGAAAATACAGAAGCCTGGGAAAAGTATTTTGAAGATTCAGCCAACGA GACTAACCTTCAGGAAGGAACGGATTATAACATAACTAAAGAAGATTATTCCGTGAAATTTTCCCTTTTCCCGGAAAACA AAACCATCAATTTTAAAGCATACAATGCGATAATAAAAATGAAGACAGAAATTCAATAA
Upstream 100 bases:
>100_bases GGATAGTTGCAGGAAATGCTGGTGAGAGAATTACAAATCTTAATGTTAGCTTCATGGTGTTGCATGTAAGTTAAGAAACT AAATAAGGAAAGGGAAATAG
Downstream 100 bases:
>100_bases AGTCTATCTTAGCCCCTTTCCTTACCAATTTTTTAAGACGTGCAGCCGCAAGAAAAATAGAGAAGATTTCGGAAAAATAA ATTCTGTAAATTTTTCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVWQDMSRFKSNVDILAAGIEMN PNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGMLIEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYEN GALIVTQNGRSVMKLFPGIVLEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKAYNAIIKMKTEIQ
Sequences:
>Translated_312_residues MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVWQDMSRFKSNVDILAAGIEMN PNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGMLIEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYEN GALIVTQNGRSVMKLFPGIVLEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKAYNAIIKMKTEIQ >Mature_312_residues MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVWQDMSRFKSNVDILAAGIEMN PNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGMLIEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYEN GALIVTQNGRSVMKLFPGIVLEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKAYNAIIKMKTEIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34493; Mature: 34493
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVW CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHH QDMSRFKSNVDILAAGIEMNPNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGML HHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCEECCCCCCCEEEECCCCCEEE IEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYENGALIVTQNGRSVMKLFPGIV EEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHEEEECCEEEEEECCCHHHHHCCCEE LEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA EECCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEECCCCEEEEECCCHHHCCCCCCCCC NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKA CEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCEEEEEE YNAIIKMKTEIQ EEEEEEEEECCC >Mature Secondary Structure MKKRFFESISSFYKSESGIAAAVAAALLLGIIVVSMTTIQVQYVPVWKEDAEYAHMSDVW CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHH QDMSRFKSNVDILAAGIEMNPNSRITLNSPIQMGGADVPFIGGMKTGGTLTVNNAISGML HHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCEECCCCCCCEEEECCCCCEEE IEVNDDMSGYDSNQTLSDIGSVSYRPTNIHSVEETYCYENGALIVTQNGRSVMKLFPGIV EEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHEEEECCEEEEEECCCHHHHHCCCEE LEDGAGIASVNLSARIATLEGTRGVMASNSMENIRLTSQDFINIYDSDQEYTNENTTKKA EECCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEECCCCEEEEECCCHHHCCCCCCCCC NVTSVDLTIYTENTEAWEKYFEDSANETNLQEGTDYNITKEDYSVKFSLFPENKTINFKA CEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEEEEECCCCEEEEEE YNAIIKMKTEIQ EEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA