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The map label for this gene is fdhD [H]

Identifier: 21227608

GI number: 21227608

Start: 1794961

End: 1795701

Strand: Reverse

Name: fdhD [H]

Synonym: MM_1506

Alternate gene names: 21227608

Gene position: 1795701-1794961 (Counterclockwise)

Preceding gene: 21227609

Following gene: 21227604

Centisome position: 43.84

GC content: 46.69

Gene sequence:

>741_bases
ATGCCTGAAAAATACACTACCCCATACCCTGCCAGAAGAATCCATTCCGACGGCAGGGCTGAAGATACCGAAGTGCTGCT
TGCAAAGGAATGCCCTGTTAAACTTTTTCTCGACGGCAAACAATTTACAACTCTTTTTGCCTCCCCGCTTGAATTGAAAG
AGCTTGCAGTAGGTCATCTTATCACAGAAGGGATTCTCAGTTTCAAAGAGATTGCAGGGGTTGAGGTGGAAGGCAATGAA
GTTCATATACTGACTCTAAAGGGAAAACACCCCATACAGGATGAATCATCCCGACCAGCCGGAGGAGAAACAAAAAAACA
AATTTTTGTGAATTCTGACGCCGTTTTTGACCCTGAAGCCCTTTTTGAAGGCATAGCTTATCTCGAGTCCGATACATACA
AACTTACCAGAGGCACCCATCTCGCTGCCCTTATAGATAAAAAAGGAAAGCTTGCAGTTCAGATCGTTGACGTAGGCAGG
CACAATGCCGTAGATAAGGTGGTAGGGGCTGCATTTCTGAGGATGATAGACCTCTCGCAACACTATATGCTTTCCACAGG
CCGGCAGCCCGCTTACATGGTCACAAAAGCAGCCCGTGCAGGAATCCCACTTGTCGCCACAAAAGCCATGCCATTTGATT
CCGGCGTCGAAGCCGCAAAAAAAGCTAACTTATGTCTTGTAGGGCAGCTAAGGAAAGAGTCAATGCTCGTCTTTACGAAT
GAGTGGCGAGTCAGGATTTAA

Upstream 100 bases:

>100_bases
TCCATATCGACTACCTTGCAGTGCGCCTGAACTAACGGAAAAGAAAAAGGCATATGGACACCATACTCGCTATAAAGAAA
AAGCGAGAAACCAGATCCAT

Downstream 100 bases:

>100_bases
GCGTGCAGTTCCCGCTAATGGGAAAGAAAACCGGAATTTAAAAACACCTGAGTTTAAAAATAATTAGAGGGTGCCTTTCG
TGCTCTTTACTTCTTTGCCC

Product: FdhD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MPEKYTTPYPARRIHSDGRAEDTEVLLAKECPVKLFLDGKQFTTLFASPLELKELAVGHLITEGILSFKEIAGVEVEGNE
VHILTLKGKHPIQDESSRPAGGETKKQIFVNSDAVFDPEALFEGIAYLESDTYKLTRGTHLAALIDKKGKLAVQIVDVGR
HNAVDKVVGAAFLRMIDLSQHYMLSTGRQPAYMVTKAARAGIPLVATKAMPFDSGVEAAKKANLCLVGQLRKESMLVFTN
EWRVRI

Sequences:

>Translated_246_residues
MPEKYTTPYPARRIHSDGRAEDTEVLLAKECPVKLFLDGKQFTTLFASPLELKELAVGHLITEGILSFKEIAGVEVEGNE
VHILTLKGKHPIQDESSRPAGGETKKQIFVNSDAVFDPEALFEGIAYLESDTYKLTRGTHLAALIDKKGKLAVQIVDVGR
HNAVDKVVGAAFLRMIDLSQHYMLSTGRQPAYMVTKAARAGIPLVATKAMPFDSGVEAAKKANLCLVGQLRKESMLVFTN
EWRVRI
>Mature_245_residues
PEKYTTPYPARRIHSDGRAEDTEVLLAKECPVKLFLDGKQFTTLFASPLELKELAVGHLITEGILSFKEIAGVEVEGNEV
HILTLKGKHPIQDESSRPAGGETKKQIFVNSDAVFDPEALFEGIAYLESDTYKLTRGTHLAALIDKKGKLAVQIVDVGRH
NAVDKVVGAAFLRMIDLSQHYMLSTGRQPAYMVTKAARAGIPLVATKAMPFDSGVEAAKKANLCLVGQLRKESMLVFTNE
WRVRI

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=239, Percent_Identity=28.4518828451883, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 27091; Mature: 26960

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKYTTPYPARRIHSDGRAEDTEVLLAKECPVKLFLDGKQFTTLFASPLELKELAVGHL
CCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEECCCEEEEECCCCHHHHHHHHHHH
ITEGILSFKEIAGVEVEGNEVHILTLKGKHPIQDESSRPAGGETKKQIFVNSDAVFDPEA
HHHHHHHHHHHCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHH
LFEGIAYLESDTYKLTRGTHLAALIDKKGKLAVQIVDVGRHNAVDKVVGAAFLRMIDLSQ
HHHHHHHHCCCCEEEECCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCH
HYMLSTGRQPAYMVTKAARAGIPLVATKAMPFDSGVEAAKKANLCLVGQLRKESMLVFTN
HHHHHCCCCCHHEEEHHHHCCCCEEEEECCCCCCCHHHHHHCCEEEEEECCCCEEEEEEC
EWRVRI
CEEEEC
>Mature Secondary Structure 
PEKYTTPYPARRIHSDGRAEDTEVLLAKECPVKLFLDGKQFTTLFASPLELKELAVGHL
CCCCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEECCCEEEEECCCCHHHHHHHHHHH
ITEGILSFKEIAGVEVEGNEVHILTLKGKHPIQDESSRPAGGETKKQIFVNSDAVFDPEA
HHHHHHHHHHHCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHH
LFEGIAYLESDTYKLTRGTHLAALIDKKGKLAVQIVDVGRHNAVDKVVGAAFLRMIDLSQ
HHHHHHHHCCCCEEEECCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCH
HYMLSTGRQPAYMVTKAARAGIPLVATKAMPFDSGVEAAKKANLCLVGQLRKESMLVFTN
HHHHHCCCCCHHEEEHHHHCCCCEEEEECCCCCCCHHHHHHCCEEEEEECCCCEEEEEEC
EWRVRI
CEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]