| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227603
Identifier: 21227603
GI number: 21227603
Start: 1789085
End: 1789714
Strand: Reverse
Name: 21227603
Synonym: MM_1501
Alternate gene names: NA
Gene position: 1789714-1789085 (Counterclockwise)
Preceding gene: 21227604
Following gene: 21227602
Centisome position: 43.69
GC content: 44.13
Gene sequence:
>630_bases ATGGGGATTGAACCCTTTACTTCGGACCGCTCGGGGGAAGGAGCCGACAGAGTCAGCACCCTCTGTAAAGAGATAAAAAC TACCAGAGAAAAAATGGAAAAGGAAGCCCTTACTTTTATCGAGGCTACTAAAAATTTCTCACTGGAATGGATTCAGAGAG AAATGAGCCCAAACATATCTCAGCTGAAAAAGGGAGCTTGCCCTACGAATGATGAAATTTGCAAAGGCAAAAGGAGTGAA CTGGCGAGCTCTGAGGGCTTGCCCTCCCGAGTACAGGATATTATTGAAGAGCAACTCAACCGCGATGATTACTGGATACA CAGAAGCGAACAGCTTTGTACGGACATTTCCCTCGACTATATTGAGTTCAAAAAAGAAAAAATCCGGAAGGATCTCACAT CAAGCATCAGGATGATTCTGGGCTGCGTAGCAGAGATCTTCGCCGGGATAAAAGATGAAAACCTAGAAGATAAGATATGG GTAAGAGAGCGAGGTAGACGAAAATACATATGCATCCTCAGGTTTTCGGACGAAATGACAGCTTCCCTTGACCGCTATTT CTCTATGCTTGAGGAGCTCTTTTTCCTGGAGTATGAAATGAATAAGGAGAAAGAAAAGGAAACCGGATAG
Upstream 100 bases:
>100_bases GCAAACTGAAGTTCTGAAAGCTCCAATAAAAAACAAGTTTCCAGAGAAAATATGTTAAAAAAGAAGAATAGAGGAATAAA ACTGAACAGGAGATAATAAA
Downstream 100 bases:
>100_bases CAGTAAGATAAAAGAAACCCCGAAAAGAAACCTGAAAAACAGCCAGAACGATACTGGGAGAGGAAAACATTCAGGTTAGA TCAGGACTTGATAAGTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGIEPFTSDRSGEGADRVSTLCKEIKTTREKMEKEALTFIEATKNFSLEWIQREMSPNISQLKKGACPTNDEICKGKRSE LASSEGLPSRVQDIIEEQLNRDDYWIHRSEQLCTDISLDYIEFKKEKIRKDLTSSIRMILGCVAEIFAGIKDENLEDKIW VRERGRRKYICILRFSDEMTASLDRYFSMLEELFFLEYEMNKEKEKETG
Sequences:
>Translated_209_residues MGIEPFTSDRSGEGADRVSTLCKEIKTTREKMEKEALTFIEATKNFSLEWIQREMSPNISQLKKGACPTNDEICKGKRSE LASSEGLPSRVQDIIEEQLNRDDYWIHRSEQLCTDISLDYIEFKKEKIRKDLTSSIRMILGCVAEIFAGIKDENLEDKIW VRERGRRKYICILRFSDEMTASLDRYFSMLEELFFLEYEMNKEKEKETG >Mature_208_residues GIEPFTSDRSGEGADRVSTLCKEIKTTREKMEKEALTFIEATKNFSLEWIQREMSPNISQLKKGACPTNDEICKGKRSEL ASSEGLPSRVQDIIEEQLNRDDYWIHRSEQLCTDISLDYIEFKKEKIRKDLTSSIRMILGCVAEIFAGIKDENLEDKIWV RERGRRKYICILRFSDEMTASLDRYFSMLEELFFLEYEMNKEKEKETG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24482; Mature: 24351
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEPFTSDRSGEGADRVSTLCKEIKTTREKMEKEALTFIEATKNFSLEWIQREMSPNIS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHH QLKKGACPTNDEICKGKRSELASSEGLPSRVQDIIEEQLNRDDYWIHRSEQLCTDISLDY HHHCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHCCHHH IEFKKEKIRKDLTSSIRMILGCVAEIFAGIKDENLEDKIWVRERGRRKYICILRFSDEMT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEECCHHH ASLDRYFSMLEELFFLEYEMNKEKEKETG HHHHHHHHHHHHHHHHHHHHCCHHCCCCC >Mature Secondary Structure GIEPFTSDRSGEGADRVSTLCKEIKTTREKMEKEALTFIEATKNFSLEWIQREMSPNIS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHH QLKKGACPTNDEICKGKRSELASSEGLPSRVQDIIEEQLNRDDYWIHRSEQLCTDISLDY HHHCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHCCHHH IEFKKEKIRKDLTSSIRMILGCVAEIFAGIKDENLEDKIWVRERGRRKYICILRFSDEMT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEECCHHH ASLDRYFSMLEELFFLEYEMNKEKEKETG HHHHHHHHHHHHHHHHHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA