| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227600
Identifier: 21227600
GI number: 21227600
Start: 1785688
End: 1786476
Strand: Reverse
Name: 21227600
Synonym: MM_1498
Alternate gene names: NA
Gene position: 1786476-1785688 (Counterclockwise)
Preceding gene: 21227601
Following gene: 21227599
Centisome position: 43.61
GC content: 40.18
Gene sequence:
>789_bases TTGAAACTGTATCATCTTTTCTTAGCCAGTCTTTTACTGGCGACCCTTCTCTCCCCAGTTCTTTTTGCAAAACCCTGTGC TGCAGCTTTTATTCCCGGCAATAATATAACGCTGGAAAGAAACGGGATAACATGGGATTATGACGAAAAAACCACAGATA ACGAAGCTGTTTTATTCCGGAGAATTATAGACGCAGAAACAGGCAATAATGACGGCTTTGTTAATGCCTGGGAAATTCGG AAAATGGAAGTCCTTTTAGGGGAAAAGATGAAGAAAGCCGTAGAAGAAGAACCTGATATAAAACTAAATTCAACCTCAGA AATTGTTGAATTAAAAGACATTGAGTTCTGGATTCCCGAAGAAGCCCTCGGAAGAACTTATAAAAATTCATCAATCATAA ACCGTGCCAGTGTTATATACGGTTTCAAAGAAGAGGCCGGCACCGGAACAGAGATCTGGCTTATGGGAACTCCAGATTCA TATGTCACGATCACTCTTCCATCAGGTTTTGACGCAGAGAGAATTGAGGGGCTTAACAACAAAAGCCTCGGGTTTGAAAA TAAGCGTACAGTATTGAAGGGAAATTTCAACTCTGAGAAAAACATTACCTTATGGCTTTCGGAAAATGAAAGTTTTAAAG CCGAACTGCAGGATATTGAAGCTAATGAGAATAAAAGTGCAGAGAACGAGAGCGGAACAGTAGAAAACAGCACATTGAAC ACCGGAGATAAGTCAGAGTCCGGGAGCCTCAAAGGTTTTTTTAAAAAAATCCTTAAAAAAGCTGGCTGA
Upstream 100 bases:
>100_bases TGAGGTAACAACTAAATAAATTTACGAGGAGATAAGTTACAGAAAAAATGAGAAGTTACCGGGACGGCAGACAAATAAAA TGAAAAAAGAGTTGACATTC
Downstream 100 bases:
>100_bases TTTTTCCCTGGCCCTGCCTGAGTCCAAAAAGTTAATCTTGTTTGAGGCTAATTCAGAAAAACATGCTCATAGAACAGATT CCACTTAAAAACGGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKLYHLFLASLLLATLLSPVLFAKPCAAAFIPGNNITLERNGITWDYDEKTTDNEAVLFRRIIDAETGNNDGFVNAWEIR KMEVLLGEKMKKAVEEEPDIKLNSTSEIVELKDIEFWIPEEALGRTYKNSSIINRASVIYGFKEEAGTGTEIWLMGTPDS YVTITLPSGFDAERIEGLNNKSLGFENKRTVLKGNFNSEKNITLWLSENESFKAELQDIEANENKSAENESGTVENSTLN TGDKSESGSLKGFFKKILKKAG
Sequences:
>Translated_262_residues MKLYHLFLASLLLATLLSPVLFAKPCAAAFIPGNNITLERNGITWDYDEKTTDNEAVLFRRIIDAETGNNDGFVNAWEIR KMEVLLGEKMKKAVEEEPDIKLNSTSEIVELKDIEFWIPEEALGRTYKNSSIINRASVIYGFKEEAGTGTEIWLMGTPDS YVTITLPSGFDAERIEGLNNKSLGFENKRTVLKGNFNSEKNITLWLSENESFKAELQDIEANENKSAENESGTVENSTLN TGDKSESGSLKGFFKKILKKAG >Mature_262_residues MKLYHLFLASLLLATLLSPVLFAKPCAAAFIPGNNITLERNGITWDYDEKTTDNEAVLFRRIIDAETGNNDGFVNAWEIR KMEVLLGEKMKKAVEEEPDIKLNSTSEIVELKDIEFWIPEEALGRTYKNSSIINRASVIYGFKEEAGTGTEIWLMGTPDS YVTITLPSGFDAERIEGLNNKSLGFENKRTVLKGNFNSEKNITLWLSENESFKAELQDIEANENKSAENESGTVENSTLN TGDKSESGSLKGFFKKILKKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29262; Mature: 29262
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYHLFLASLLLATLLSPVLFAKPCAAAFIPGNNITLERNGITWDYDEKTTDNEAVLFR CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCEECCCCCCCCCHHHHHH RIIDAETGNNDGFVNAWEIRKMEVLLGEKMKKAVEEEPDIKLNSTSEIVELKDIEFWIPE HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEECCH EALGRTYKNSSIINRASVIYGFKEEAGTGTEIWLMGTPDSYVTITLPSGFDAERIEGLNN HHHCCCCCCCHHHHHHHEEEEEHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHCCCCC KSLGFENKRTVLKGNFNSEKNITLWLSENESFKAELQDIEANENKSAENESGTVENSTLN CCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCC TGDKSESGSLKGFFKKILKKAG CCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKLYHLFLASLLLATLLSPVLFAKPCAAAFIPGNNITLERNGITWDYDEKTTDNEAVLFR CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCEECCCCCCCCCHHHHHH RIIDAETGNNDGFVNAWEIRKMEVLLGEKMKKAVEEEPDIKLNSTSEIVELKDIEFWIPE HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEECCH EALGRTYKNSSIINRASVIYGFKEEAGTGTEIWLMGTPDSYVTITLPSGFDAERIEGLNN HHHCCCCCCCHHHHHHHEEEEEHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHCCCCC KSLGFENKRTVLKGNFNSEKNITLWLSENESFKAELQDIEANENKSAENESGTVENSTLN CCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCC TGDKSESGSLKGFFKKILKKAG CCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA