Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227559

Identifier: 21227559

GI number: 21227559

Start: 1737695

End: 1738372

Strand: Reverse

Name: 21227559

Synonym: MM_1457

Alternate gene names: NA

Gene position: 1738372-1737695 (Counterclockwise)

Preceding gene: 21227560

Following gene: 21227558

Centisome position: 42.44

GC content: 44.25

Gene sequence:

>678_bases
GTGGAAAATGAAATGAAAGAAAAAGCAGTCATTTTTACCGGAAACAGCATAAGCCATGAGGACGCAAAAAAAATTCTCCT
GGCTAATTACCAGCCCCCTGTGCGCAGGTTCCAGCTTGAAAAATTTATCCAGCAGGGGTATAAGGTCATGGGAATTATAG
ATGGAATTTTCTTTGACCGGGCTGCAGTAGGGCACAGAGAAATAATTTCTGCCCTTAACGCAGGAGTGAGGGTTGTGGGT
GGTGCAAGCATGGGGGCACTCAGGGCTTCTGAACTTGATACACATGGGATGATCGGCGTAGGAAAGGTCTATGAATGGTA
CAGGGACGGTGTAATTGAATCTGATGACGAGGTTGCCATCAGTACCAACCCTGAAACCTTTGAACCCATTTCCGTGCCGC
TGGTAAACATAAGGGAGACCCTTAAAGCTGCTCTGGGTGCCGGAATTTTAAGCGAAAAAGAATATGAGGATATTCTTGAG
CTTGCAATCAGTACCTATTACCCTGACCGCAGTTATCTCGGGCTTACGAAAGAAGGGGCTAAAAAAGGTCTCATCTCTGA
AGAAAAAAGGAAACTACTACTTGATTTTTGCATTAACAGTGAAGTCGATGTAAAAAAACGGGATGCAGTTCTTGTGATTG
AGACTGTAAAAAGGCTTGTCGAAGAGACTGAGGTTTAA

Upstream 100 bases:

>100_bases
AAGAAACAAAAACGATAAGCCCTGGAAAAGAAGATAAAGCCTCTGAAAAGGAAATAAAACTGTAAGAAAGAACATAAATC
CCTGAAAAGAAAATAAAGCT

Downstream 100 bases:

>100_bases
AACCTGCTAAAGTCTCCCCAAATTAGCGTCCTCAAATTAGCAGTTTACCCTTCCAGATCCCGGTTACCTTGTGGAGGAAT
AGAGCTGTAAGGTTGTCACA

Product: hypothetical protein

Products: NA

Alternate protein names: TfuA Domain Protein Core; TfuA-Like Protein; Domain Protein; TfuA Domain Protein; TfuA Protein; Trifolitoxin Related Protein; Nifs Protein; TfuA Domain-Containing Protein Core; Antibiotic Resistance Protein; TfuA-Like; TfuA-Like Core

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MENEMKEKAVIFTGNSISHEDAKKILLANYQPPVRRFQLEKFIQQGYKVMGIIDGIFFDRAAVGHREIISALNAGVRVVG
GASMGALRASELDTHGMIGVGKVYEWYRDGVIESDDEVAISTNPETFEPISVPLVNIRETLKAALGAGILSEKEYEDILE
LAISTYYPDRSYLGLTKEGAKKGLISEEKRKLLLDFCINSEVDVKKRDAVLVIETVKRLVEETEV

Sequences:

>Translated_225_residues
MENEMKEKAVIFTGNSISHEDAKKILLANYQPPVRRFQLEKFIQQGYKVMGIIDGIFFDRAAVGHREIISALNAGVRVVG
GASMGALRASELDTHGMIGVGKVYEWYRDGVIESDDEVAISTNPETFEPISVPLVNIRETLKAALGAGILSEKEYEDILE
LAISTYYPDRSYLGLTKEGAKKGLISEEKRKLLLDFCINSEVDVKKRDAVLVIETVKRLVEETEV
>Mature_225_residues
MENEMKEKAVIFTGNSISHEDAKKILLANYQPPVRRFQLEKFIQQGYKVMGIIDGIFFDRAAVGHREIISALNAGVRVVG
GASMGALRASELDTHGMIGVGKVYEWYRDGVIESDDEVAISTNPETFEPISVPLVNIRETLKAALGAGILSEKEYEDILE
LAISTYYPDRSYLGLTKEGAKKGLISEEKRKLLLDFCINSEVDVKKRDAVLVIETVKRLVEETEV

Specific function: Unknown

COG id: COG3482

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25053; Mature: 25053

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEMKEKAVIFTGNSISHEDAKKILLANYQPPVRRFQLEKFIQQGYKVMGIIDGIFFDR
CCCCCCCCEEEEECCCCCHHHHHHHEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AAVGHREIISALNAGVRVVGGASMGALRASELDTHGMIGVGKVYEWYRDGVIESDDEVAI
HHCCHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCEEE
STNPETFEPISVPLVNIRETLKAALGAGILSEKEYEDILELAISTYYPDRSYLGLTKEGA
ECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
KKGLISEEKRKLLLDFCINSEVDVKKRDAVLVIETVKRLVEETEV
HCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MENEMKEKAVIFTGNSISHEDAKKILLANYQPPVRRFQLEKFIQQGYKVMGIIDGIFFDR
CCCCCCCCEEEEECCCCCHHHHHHHEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AAVGHREIISALNAGVRVVGGASMGALRASELDTHGMIGVGKVYEWYRDGVIESDDEVAI
HHCCHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCEEE
STNPETFEPISVPLVNIRETLKAALGAGILSEKEYEDILELAISTYYPDRSYLGLTKEGA
ECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
KKGLISEEKRKLLLDFCINSEVDVKKRDAVLVIETVKRLVEETEV
HCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA