| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is uspF [C]
Identifier: 21227557
GI number: 21227557
Start: 1735933
End: 1736385
Strand: Reverse
Name: uspF [C]
Synonym: MM_1455
Alternate gene names: 21227557
Gene position: 1736385-1735933 (Counterclockwise)
Preceding gene: 21227558
Following gene: 21227556
Centisome position: 42.39
GC content: 46.36
Gene sequence:
>453_bases ATGGGGAGAGATCTTTACAAAAAGATCCTGATTGCTACTGACGGTTCGGAGAACGGGGCGCAGGCAATAAACGCAGGAAT AGAAATTGCAAGGCTGAGCCAGGGGAAAGTCTACGCTCTTTATGTTATTGATAACACATGTTATCCAGCCGAAAGAAGTG ACCCGAGATGGAAGACAGCTATGGAAGAGCAGTTTAAGACATTCGGGCTTGAAATGACAGCAATGGTCGAAGAGGCTGCC AAAGTAGCAGGCGTAGATGTCGAATTTGTAACAAGGGAAGGACACCCTGCCGAAAAGATCCTCGATTTTGCAGAAAAAAA GTCAGTTGATATGATTGTCGTGGGTTCTCTGGGAAAAACCGATGTCGAACGCTTTCTTCTTGGCAGCGTATCCGAAAAGG TCGTCAGGAATGCAAAAGTTCCGGTACTTGTCGTACGTGCAAAGAGCCTGTAA
Upstream 100 bases:
>100_bases AAAAGAGGCAGCCTGATTCTTTTCAGAAAAATCTGTTCAGGATCAGGTTGCTTAATTAAATAATCGGTTTAATTTGGGGT AAACCGGGAGGAAGAGGGGT
Downstream 100 bases:
>100_bases AAAAGCTAAAACTCCGAAATATAGGAAAAAATTCAGAAATAACAAACGAGAACATGGGGGGTAATCATGGAAGAAAATAT TGGATCTAAACCACAAAAAA
Product: universal stress protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MGRDLYKKILIATDGSENGAQAINAGIEIARLSQGKVYALYVIDNTCYPAERSDPRWKTAMEEQFKTFGLEMTAMVEEAA KVAGVDVEFVTREGHPAEKILDFAEKKSVDMIVVGSLGKTDVERFLLGSVSEKVVRNAKVPVLVVRAKSL
Sequences:
>Translated_150_residues MGRDLYKKILIATDGSENGAQAINAGIEIARLSQGKVYALYVIDNTCYPAERSDPRWKTAMEEQFKTFGLEMTAMVEEAA KVAGVDVEFVTREGHPAEKILDFAEKKSVDMIVVGSLGKTDVERFLLGSVSEKVVRNAKVPVLVVRAKSL >Mature_149_residues GRDLYKKILIATDGSENGAQAINAGIEIARLSQGKVYALYVIDNTCYPAERSDPRWKTAMEEQFKTFGLEMTAMVEEAAK VAGVDVEFVTREGHPAEKILDFAEKKSVDMIVVGSLGKTDVERFLLGSVSEKVVRNAKVPVLVVRAKSL
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16466; Mature: 16335
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRDLYKKILIATDGSENGAQAINAGIEIARLSQGKVYALYVIDNTCYPAERSDPRWKTA CCHHHEEEEEEEECCCCCCHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHH MEEQFKTFGLEMTAMVEEAAKVAGVDVEFVTREGHPAEKILDFAEKKSVDMIVVGSLGKT HHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHH DVERFLLGSVSEKVVRNAKVPVLVVRAKSL HHHHHHHHHHHHHHHHCCCCCEEEEEECCC >Mature Secondary Structure GRDLYKKILIATDGSENGAQAINAGIEIARLSQGKVYALYVIDNTCYPAERSDPRWKTA CHHHEEEEEEEECCCCCCHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHH MEEQFKTFGLEMTAMVEEAAKVAGVDVEFVTREGHPAEKILDFAEKKSVDMIVVGSLGKT HHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHH DVERFLLGSVSEKVVRNAKVPVLVVRAKSL HHHHHHHHHHHHHHHHCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]