| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227553
Identifier: 21227553
GI number: 21227553
Start: 1733048
End: 1733485
Strand: Reverse
Name: 21227553
Synonym: MM_1451
Alternate gene names: NA
Gene position: 1733485-1733048 (Counterclockwise)
Preceding gene: 21227554
Following gene: 21227549
Centisome position: 42.32
GC content: 44.52
Gene sequence:
>438_bases ATGAAACGAAATCCTTACAGGAAAATTCTACTTGCAACAGACGGTTCGGAAAACTCAAAAAGTGCAGCCTGTTCAGGGCT TGAGATTGCAAGGTGTACCGGCGCTGAGGTATATGCCGTATATATCGCCGGAATTTCCTGCTGTTCTCCGATTATGCCTG AAAGTTATGACTGGGAGATAGGAAAAGAGGGAAGTGAAGCCGTTGCCGAGATAGAGGAACTGGGAAAAAAAATAAATGTA AAGGTAAATCCTGTCCTTCTTCAGGGGTATCCTGCTCAGGAACTTCTGGAATTTGCAGAAAAAAATGATATTGATATGAT TGTCATGGGGACACAGGGAAAAACCGGAATTGACCGGTTCCTCCTTGGAGGTGTTACGGAAAAAGTTATAAGAAATTCAA AAGCGGAAGTGCTGGTCGTACGCTCTCCCTGCCCCTGA
Upstream 100 bases:
>100_bases TGCCAAAAGAGTGAAGAAGTCCTGACCCCCGTCGCGGGCGAGAAAGAACAGTGAAAAGCCGGGGCCTGAAATCAAGAAGA GTTGTCTCAGGGGATATTTT
Downstream 100 bases:
>100_bases AAAATAGATAAATTTTCTTAATGGAAAAATTTCCTTTTTTGTTTCCATATTTAATTCATTTTGCCCTGTAATACACGCTG TTTTTGGAACCTATTTCCTC
Product: universal stress protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKRNPYRKILLATDGSENSKSAACSGLEIARCTGAEVYAVYIAGISCCSPIMPESYDWEIGKEGSEAVAEIEELGKKINV KVNPVLLQGYPAQELLEFAEKNDIDMIVMGTQGKTGIDRFLLGGVTEKVIRNSKAEVLVVRSPCP
Sequences:
>Translated_145_residues MKRNPYRKILLATDGSENSKSAACSGLEIARCTGAEVYAVYIAGISCCSPIMPESYDWEIGKEGSEAVAEIEELGKKINV KVNPVLLQGYPAQELLEFAEKNDIDMIVMGTQGKTGIDRFLLGGVTEKVIRNSKAEVLVVRSPCP >Mature_145_residues MKRNPYRKILLATDGSENSKSAACSGLEIARCTGAEVYAVYIAGISCCSPIMPESYDWEIGKEGSEAVAEIEELGKKINV KVNPVLLQGYPAQELLEFAEKNDIDMIVMGTQGKTGIDRFLLGGVTEKVIRNSKAEVLVVRSPCP
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15726; Mature: 15726
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNPYRKILLATDGSENSKSAACSGLEIARCTGAEVYAVYIAGISCCSPIMPESYDWEI CCCCCCEEEEEEECCCCCCCCHHCCCCEEEECCCCEEEEEEEECHHHCCCCCCCCCCCCC GKEGSEAVAEIEELGKKINVKVNPVLLQGYPAQELLEFAEKNDIDMIVMGTQGKTGIDRF CCCCHHHHHHHHHHCCEECEEECEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCHHHH LLGGVTEKVIRNSKAEVLVVRSPCP HHHHHHHHHHCCCCCCEEEEECCCC >Mature Secondary Structure MKRNPYRKILLATDGSENSKSAACSGLEIARCTGAEVYAVYIAGISCCSPIMPESYDWEI CCCCCCEEEEEEECCCCCCCCHHCCCCEEEECCCCEEEEEEEECHHHCCCCCCCCCCCCC GKEGSEAVAEIEELGKKINVKVNPVLLQGYPAQELLEFAEKNDIDMIVMGTQGKTGIDRF CCCCHHHHHHHHHHCCEECEEECEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCHHHH LLGGVTEKVIRNSKAEVLVVRSPCP HHHHHHHHHHCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]