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The map label for this gene is syrB [C]

Identifier: 21227492

GI number: 21227492

Start: 1673998

End: 1674588

Strand: Reverse

Name: syrB [C]

Synonym: MM_1390

Alternate gene names: 21227492

Gene position: 1674588-1673998 (Counterclockwise)

Preceding gene: 21227494

Following gene: 21227491

Centisome position: 40.88

GC content: 45.85

Gene sequence:

>591_bases
ATGGCAGAAGCACAGGAAGTAGTAACACATGTAAATATAAAAGACAAGACTGCAAACCCCACACCATTAGGATTTACTGG
TCTGGGTCTTGCTGCAGTTCTCTTAAGCCTGAGTTATATAGGGCTTTACCCTGTGGATTCGATGATCGTATCCATGGCAA
TATTCCTGGGAGGCTTTGCGCAGGTCTTCGCAGGTATTATGGCATGGAAAAAAGGGAGTGTTTTTGGTGGCACGGCATTC
TGTGCATTCGGGCTTTTCTGGTTTTCCTTTGCAGGACTTCTACTTATGCCTGCACTTGGCTGGATTGAGGGCCCTGAACC
ACTGGCACTTGCAGCGTATCTCTTCCTCTGGGGAGTATATACATTCGTTATGCTGATAGCAACTTTGAAGCTGGGTAGTA
AAGCTATAATATTTATATTTGTGACCCTTTTCCTGCTGTTCATGCTGCTGGCTATCATAAACGGTACAGGAAACACAGGC
CTGCTTGTCATAGCCGGTTATGTAGGGCTTATTATGGGTCTTGCAGCCCTGTACACTGGCCTTGGGGAAGTGCTTAATGA
CGCATATGGCAGAACAATTGTCCCAATTTGA

Upstream 100 bases:

>100_bases
AAGAGCAAGCCCGTTTCCATCAAAGGCAAAGAAATAGAGAGAAAGAGGAAAGGATTTCAATAAACTGTTAAAATCAGAAG
AAATTTAGGGAGTGGTATTG

Downstream 100 bases:

>100_bases
AGATAGAAAAAATGAAAGCGTCAAAGAAATTATCAAATAAAAAGCAGTACCAAATAACACATAAAGCGAAAACAAAAAAT
TTAACGGCAAAAATGCCGAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAEAQEVVTHVNIKDKTANPTPLGFTGLGLAAVLLSLSYIGLYPVDSMIVSMAIFLGGFAQVFAGIMAWKKGSVFGGTAF
CAFGLFWFSFAGLLLMPALGWIEGPEPLALAAYLFLWGVYTFVMLIATLKLGSKAIIFIFVTLFLLFMLLAIINGTGNTG
LLVIAGYVGLIMGLAALYTGLGEVLNDAYGRTIVPI

Sequences:

>Translated_196_residues
MAEAQEVVTHVNIKDKTANPTPLGFTGLGLAAVLLSLSYIGLYPVDSMIVSMAIFLGGFAQVFAGIMAWKKGSVFGGTAF
CAFGLFWFSFAGLLLMPALGWIEGPEPLALAAYLFLWGVYTFVMLIATLKLGSKAIIFIFVTLFLLFMLLAIINGTGNTG
LLVIAGYVGLIMGLAALYTGLGEVLNDAYGRTIVPI
>Mature_195_residues
AEAQEVVTHVNIKDKTANPTPLGFTGLGLAAVLLSLSYIGLYPVDSMIVSMAIFLGGFAQVFAGIMAWKKGSVFGGTAFC
AFGLFWFSFAGLLLMPALGWIEGPEPLALAAYLFLWGVYTFVMLIATLKLGSKAIIFIFVTLFLLFMLLAIINGTGNTGL
LVIAGYVGLIMGLAALYTGLGEVLNDAYGRTIVPI

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=183, Percent_Identity=46.9945355191257, Blast_Score=168, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6324329, Length=175, Percent_Identity=35.4285714285714, Blast_Score=81, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6319855, Length=123, Percent_Identity=36.5853658536585, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 20775; Mature: 20644

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAQEVVTHVNIKDKTANPTPLGFTGLGLAAVLLSLSYIGLYPVDSMIVSMAIFLGGFA
CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QVFAGIMAWKKGSVFGGTAFCAFGLFWFSFAGLLLMPALGWIEGPEPLALAAYLFLWGVY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TFVMLIATLKLGSKAIIFIFVTLFLLFMLLAIINGTGNTGLLVIAGYVGLIMGLAALYTG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGEVLNDAYGRTIVPI
HHHHHHHHCCCEECCC
>Mature Secondary Structure 
AEAQEVVTHVNIKDKTANPTPLGFTGLGLAAVLLSLSYIGLYPVDSMIVSMAIFLGGFA
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QVFAGIMAWKKGSVFGGTAFCAFGLFWFSFAGLLLMPALGWIEGPEPLALAAYLFLWGVY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TFVMLIATLKLGSKAIIFIFVTLFLLFMLLAIINGTGNTGLLVIAGYVGLIMGLAALYTG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGEVLNDAYGRTIVPI
HHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]