| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227453
Identifier: 21227453
GI number: 21227453
Start: 1618472
End: 1620208
Strand: Reverse
Name: 21227453
Synonym: MM_1351
Alternate gene names: NA
Gene position: 1620208-1618472 (Counterclockwise)
Preceding gene: 21227456
Following gene: 21227446
Centisome position: 39.55
GC content: 37.94
Gene sequence:
>1737_bases ATGAAAACTGAAATAAAATTACTGAATGAGTATTATCCCTGGCAAGAAATAAAACTCAAGGGAGCCAGATGCTATCTAAA AGGAAATGTATTTCTGGAGAATGAATTTCTGAGTACGGAAAGGCTTGCTGAGTTAATATCTTCATTAATCTGTAAAGAGG AACAGGAAAAGGAAACGAGAAATTTCCTTAAGAAATTAAACGGGGTATTTGCACTTGTTGCCGAAACTAAAGATATTATT TTTTGTGTTGTTGATAAAACAAGAAGCACTCCTCTGTTTTATGTAAAAACAAAAAATAGTTTTATTGTATCAGACAGTGC CCATTATTTAAAAGATAAAATTAACCCGCATCTGAATGAGGAAAATGCTGCAGAGTTTATGGTTGCAGGTTATGTAACAG GCAATGAGACCTTATTTGATGATATAAAACAGGTAAGAAATGCAGAATTTTTAATTTATCAAAAAAATGACGGGCTTCTG AAGTCCTGTTGCTACTTCAAATTTTTACACGGGAATTATTACGAACTGCCTGAAAATGCATTGCTTGAGATTTTTGACCG GACACTTGTAAATGCTTTCTCAAGGCTTGTAAAAAGCACCAGTCAACAGGGAAAAACGCTGGTTGTTCCGCTAAGCGGCG GGCTTGATTCTCGCATCATTGTTGCAATGCTGAAGAGGCTTGGAGCTAATGATGTCATATGTGTAAGTTACGGGAGAAAA GGTTGCCGGGAGTCAGAAATAAGCAAAAATGTGGCAGAAGCTCTCGGGTATGAGTGGATTTTCGTAGAATCTACAGCAAA AAAATGGCGTGAAAATTATAATTCAAAAGAAGCGGACCTGTTCCGGATTTGGGCTGCAAACCTGACATCTCTCCCGCACA TGCAGGACTTTCCTACTGTAAAAGAGTTAAAGCTCCAGGGGAAAATACCGGAAAATTCAGTATTCGTTCCCGGACATACG GGATACGGCACTTATATTCCCGATTCAGCGAGTTTCGATTTAGAAGCTTACCTGGAAGCCTCTCTGAAAAAACATTACAA CCTGTGGCCATATGGACAGGAGCCCGAAAAGGTCTTCAAGCAGAGGGTAAGCAAATTAATATCAGGACTTGAAATTAAAG ACAACGAAACATTTGCAAATGCACTCGAATATTTTGATTCCAATGAAAGGCAGGCAAAATTTATCCTCAATTCAGTCAGA GTTTATGAGTTTTTTGGATACGAATGGAGGATTCCATTATGCGACTCCGAATTGATTGAATTCTTTTTAAGGGTACCGAT TGAATACAGGATAAACTGTAACCTCTACAAAAAATATGCCAGAAACTGCCTGTTTTCAGGAGAACTGGAGATGCTTCAAA AAATTGACTGTACCACCGATTTCCTGAACCTCAAGGCTCTGAAAAAGAGATCAATATATGAAAAGGTCCTTCATTACAGG ACATTCGCTCACAGTTACTATGATCAAAAAGTGAATAACCCTGTATGGGGAAGGTACTTTGAAAATCCTCTTATTTCGAG ACTTCTAATTAAAGTTTCAAGATATGAAAACGAAAATATTGATGACTACCCACTACTAAAATCAATCCTGGAATACAGAA ACGAAGAAAAATATCCTCTGACAGTGAATGGAATGAGTTCCCTTGAATACCTTTCAGGCATTAAAGGAGAAACTTATGCT TCCAGGAGCAAGAAAGTTATTAAGCCAGCTGGCTCTCCGGTAAAAAGGCCTCTTTAA
Upstream 100 bases:
>100_bases TTCGGTCTTTCTCTTAAATTGTTAAAATAATTCAGGAGCTGCAGAGAAGTTTAAAATTACCACATTGTTTAAGATGTCAG GTTTTTGGGGGGTTTGGGTT
Downstream 100 bases:
>100_bases TTAGCTGATTTTTAAATAGCTGACATGAAAAGAGGAAAACTATGGCTAAAAAACTTTAAAATAGAGATTAAGAGAATTCC TGGGATCGATGAGCTCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Asparagine Synthetase Related Protein; Asparagine Synthetase; Asparagine Synthetase Glutamine-Hydrolyzing
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MKTEIKLLNEYYPWQEIKLKGARCYLKGNVFLENEFLSTERLAELISSLICKEEQEKETRNFLKKLNGVFALVAETKDII FCVVDKTRSTPLFYVKTKNSFIVSDSAHYLKDKINPHLNEENAAEFMVAGYVTGNETLFDDIKQVRNAEFLIYQKNDGLL KSCCYFKFLHGNYYELPENALLEIFDRTLVNAFSRLVKSTSQQGKTLVVPLSGGLDSRIIVAMLKRLGANDVICVSYGRK GCRESEISKNVAEALGYEWIFVESTAKKWRENYNSKEADLFRIWAANLTSLPHMQDFPTVKELKLQGKIPENSVFVPGHT GYGTYIPDSASFDLEAYLEASLKKHYNLWPYGQEPEKVFKQRVSKLISGLEIKDNETFANALEYFDSNERQAKFILNSVR VYEFFGYEWRIPLCDSELIEFFLRVPIEYRINCNLYKKYARNCLFSGELEMLQKIDCTTDFLNLKALKKRSIYEKVLHYR TFAHSYYDQKVNNPVWGRYFENPLISRLLIKVSRYENENIDDYPLLKSILEYRNEEKYPLTVNGMSSLEYLSGIKGETYA SRSKKVIKPAGSPVKRPL
Sequences:
>Translated_578_residues MKTEIKLLNEYYPWQEIKLKGARCYLKGNVFLENEFLSTERLAELISSLICKEEQEKETRNFLKKLNGVFALVAETKDII FCVVDKTRSTPLFYVKTKNSFIVSDSAHYLKDKINPHLNEENAAEFMVAGYVTGNETLFDDIKQVRNAEFLIYQKNDGLL KSCCYFKFLHGNYYELPENALLEIFDRTLVNAFSRLVKSTSQQGKTLVVPLSGGLDSRIIVAMLKRLGANDVICVSYGRK GCRESEISKNVAEALGYEWIFVESTAKKWRENYNSKEADLFRIWAANLTSLPHMQDFPTVKELKLQGKIPENSVFVPGHT GYGTYIPDSASFDLEAYLEASLKKHYNLWPYGQEPEKVFKQRVSKLISGLEIKDNETFANALEYFDSNERQAKFILNSVR VYEFFGYEWRIPLCDSELIEFFLRVPIEYRINCNLYKKYARNCLFSGELEMLQKIDCTTDFLNLKALKKRSIYEKVLHYR TFAHSYYDQKVNNPVWGRYFENPLISRLLIKVSRYENENIDDYPLLKSILEYRNEEKYPLTVNGMSSLEYLSGIKGETYA SRSKKVIKPAGSPVKRPL >Mature_578_residues MKTEIKLLNEYYPWQEIKLKGARCYLKGNVFLENEFLSTERLAELISSLICKEEQEKETRNFLKKLNGVFALVAETKDII FCVVDKTRSTPLFYVKTKNSFIVSDSAHYLKDKINPHLNEENAAEFMVAGYVTGNETLFDDIKQVRNAEFLIYQKNDGLL KSCCYFKFLHGNYYELPENALLEIFDRTLVNAFSRLVKSTSQQGKTLVVPLSGGLDSRIIVAMLKRLGANDVICVSYGRK GCRESEISKNVAEALGYEWIFVESTAKKWRENYNSKEADLFRIWAANLTSLPHMQDFPTVKELKLQGKIPENSVFVPGHT GYGTYIPDSASFDLEAYLEASLKKHYNLWPYGQEPEKVFKQRVSKLISGLEIKDNETFANALEYFDSNERQAKFILNSVR VYEFFGYEWRIPLCDSELIEFFLRVPIEYRINCNLYKKYARNCLFSGELEMLQKIDCTTDFLNLKALKKRSIYEKVLHYR TFAHSYYDQKVNNPVWGRYFENPLISRLLIKVSRYENENIDDYPLLKSILEYRNEEKYPLTVNGMSSLEYLSGIKGETYA SRSKKVIKPAGSPVKRPL
Specific function: Unknown
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67138; Mature: 67138
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEIKLLNEYYPWQEIKLKGARCYLKGNVFLENEFLSTERLAELISSLICKEEQEKETR CCCHHHHHHHCCCCHHEEEECEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHH NFLKKLNGVFALVAETKDIIFCVVDKTRSTPLFYVKTKNSFIVSDSAHYLKDKINPHLNE HHHHHHCCCEEEEECCCEEEEEEEECCCCCCEEEEEECCCEEEECCHHHHHHCCCCCCCC ENAAEFMVAGYVTGNETLFDDIKQVRNAEFLIYQKNDGLLKSCCYFKFLHGNYYELPENA CCCCEEEEEEEEECCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEECCHHH LLEIFDRTLVNAFSRLVKSTSQQGKTLVVPLSGGLDSRIIVAMLKRLGANDVICVSYGRK HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCC GCRESEISKNVAEALGYEWIFVESTAKKWRENYNSKEADLFRIWAANLTSLPHMQDFPTV CCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCCCHHHEEEHHHHCCCCCCCCCCCH KELKLQGKIPENSVFVPGHTGYGTYIPDSASFDLEAYLEASLKKHYNLWPYGQEPEKVFK HHHEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH QRVSKLISGLEIKDNETFANALEYFDSNERQAKFILNSVRVYEFFGYEWRIPLCDSELIE HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECEEEEECCCCHHHHH FFLRVPIEYRINCNLYKKYARNCLFSGELEMLQKIDCTTDFLNLKALKKRSIYEKVLHYR HHHHCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TFAHSYYDQKVNNPVWGRYFENPLISRLLIKVSRYENENIDDYPLLKSILEYRNEEKYPL HHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCE TVNGMSSLEYLSGIKGETYASRSKKVIKPAGSPVKRPL EECCCHHHHHHHCCCCCHHHHCCCCEECCCCCCCCCCC >Mature Secondary Structure MKTEIKLLNEYYPWQEIKLKGARCYLKGNVFLENEFLSTERLAELISSLICKEEQEKETR CCCHHHHHHHCCCCHHEEEECEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHH NFLKKLNGVFALVAETKDIIFCVVDKTRSTPLFYVKTKNSFIVSDSAHYLKDKINPHLNE HHHHHHCCCEEEEECCCEEEEEEEECCCCCCEEEEEECCCEEEECCHHHHHHCCCCCCCC ENAAEFMVAGYVTGNETLFDDIKQVRNAEFLIYQKNDGLLKSCCYFKFLHGNYYELPENA CCCCEEEEEEEEECCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEECCHHH LLEIFDRTLVNAFSRLVKSTSQQGKTLVVPLSGGLDSRIIVAMLKRLGANDVICVSYGRK HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCC GCRESEISKNVAEALGYEWIFVESTAKKWRENYNSKEADLFRIWAANLTSLPHMQDFPTV CCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCCCHHHEEEHHHHCCCCCCCCCCCH KELKLQGKIPENSVFVPGHTGYGTYIPDSASFDLEAYLEASLKKHYNLWPYGQEPEKVFK HHHEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH QRVSKLISGLEIKDNETFANALEYFDSNERQAKFILNSVRVYEFFGYEWRIPLCDSELIE HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECEEEEECCCCHHHHH FFLRVPIEYRINCNLYKKYARNCLFSGELEMLQKIDCTTDFLNLKALKKRSIYEKVLHYR HHHHCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TFAHSYYDQKVNNPVWGRYFENPLISRLLIKVSRYENENIDDYPLLKSILEYRNEEKYPL HHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCE TVNGMSSLEYLSGIKGETYASRSKKVIKPAGSPVKRPL EECCCHHHHHHHCCCCCHHHHCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA