Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227438

Identifier: 21227438

GI number: 21227438

Start: 1594052

End: 1594507

Strand: Direct

Name: 21227438

Synonym: MM_1336

Alternate gene names: NA

Gene position: 1594052-1594507 (Clockwise)

Preceding gene: 21227437

Following gene: 21227447

Centisome position: 38.91

GC content: 40.35

Gene sequence:

>456_bases
ATGGACCGCGAAACAACCCGGGATCAAAATATAGAAGAGAACGAAATTTTTGACGGTGAAAACCTCAACCTTCCGGATAT
TCCTCTTCCGGAAACAGACAATGTGCTGTACTCGATACTTAACTCCCTCAACCAGAATATCGCAGACTTTTACACGTTTG
TGAAGTTCAACAGTTATCTCTCGGAAGACCACCTTAACGTTGAGTTGCTTAAAAGAAGTATGGGCATCCACAGGGACTTT
GCGGCCCTTTTCCTGCATACTAAAGAGGAACTTATATTTACATATCCGGAATTCATTGAAAAGATTGAAAAACTGCTGTT
TAAGGGGGAAGTGGGTACAGACTGTATAAAATATACACAAAAAATTTGCAGATCAATAAGTGATTATAAGATCGCTCTGC
ACAGAGAAGGTTATCTGCCAGACCTCAGAAGACAGCTGCCTCTTGTTGATATTTAA

Upstream 100 bases:

>100_bases
AAGGTAAATACCTGTTCCGTCTGGCATTAAATCGTGACTGCCTGAACTAAAAAACTAATTATAAAATCTAAACTATAAAA
CGCCATACCAGGGTGATAAA

Downstream 100 bases:

>100_bases
TTTCCAGGCAACTTTAATTTCCAGGCAACTTTCTTTTTTTCTATTTTTTTCACTTTTTTTCTGCCTTCCCTTATTCTTTT
TCTACTTCTCTTAGTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MDRETTRDQNIEENEIFDGENLNLPDIPLPETDNVLYSILNSLNQNIADFYTFVKFNSYLSEDHLNVELLKRSMGIHRDF
AALFLHTKEELIFTYPEFIEKIEKLLFKGEVGTDCIKYTQKICRSISDYKIALHREGYLPDLRRQLPLVDI

Sequences:

>Translated_151_residues
MDRETTRDQNIEENEIFDGENLNLPDIPLPETDNVLYSILNSLNQNIADFYTFVKFNSYLSEDHLNVELLKRSMGIHRDF
AALFLHTKEELIFTYPEFIEKIEKLLFKGEVGTDCIKYTQKICRSISDYKIALHREGYLPDLRRQLPLVDI
>Mature_151_residues
MDRETTRDQNIEENEIFDGENLNLPDIPLPETDNVLYSILNSLNQNIADFYTFVKFNSYLSEDHLNVELLKRSMGIHRDF
AALFLHTKEELIFTYPEFIEKIEKLLFKGEVGTDCIKYTQKICRSISDYKIALHREGYLPDLRRQLPLVDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17790; Mature: 17790

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRETTRDQNIEENEIFDGENLNLPDIPLPETDNVLYSILNSLNQNIADFYTFVKFNSYL
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEDHLNVELLKRSMGIHRDFAALFLHTKEELIFTYPEFIEKIEKLLFKGEVGTDCIKYTQ
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCHHHHHHHH
KICRSISDYKIALHREGYLPDLRRQLPLVDI
HHHHHHHHHEEEEECCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MDRETTRDQNIEENEIFDGENLNLPDIPLPETDNVLYSILNSLNQNIADFYTFVKFNSYL
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEDHLNVELLKRSMGIHRDFAALFLHTKEELIFTYPEFIEKIEKLLFKGEVGTDCIKYTQ
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCHHHHHHHH
KICRSISDYKIALHREGYLPDLRRQLPLVDI
HHHHHHHHHEEEEECCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA