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The map label for this gene is 21227409

Identifier: 21227409

GI number: 21227409

Start: 1555307

End: 1556476

Strand: Direct

Name: 21227409

Synonym: MM_1307

Alternate gene names: NA

Gene position: 1555307-1556476 (Clockwise)

Preceding gene: 21227407

Following gene: 21227410

Centisome position: 37.97

GC content: 42.14

Gene sequence:

>1170_bases
ATGAAAAGAGGGGATGAGGAAATAGATTCTGGCTTTGTTGAGCGGCTGGCTGGATTTCTGGGATTTGATGAAGAAAGAGT
TCAACACCTTTTTGAAAAAATCTATCTTGCGAGAAATTGGGGGAAACATGACTATTTATTCCGTTTTGACAAGGAGATTT
CTCGCATAGAAAGAGGTACGGTACTTTACGAAAAGGGAGACTCGTTTGAAGTAATTATGGGTTTTCCCAAAATCCGGAGA
GCTATGGTACTGGACCCCACTCTAAAGAAACATTTCAGCGGGCTTGAGAAGATAACTGTAGAAGAAAAGATGAACGGGTA
TAATGTCAGGGTTGCAAAAGTAAAAGACGATATCCTGGCAATTACCAGAAGCGGCTATATTTGCCCCTATACTACTGAAA
AGGCAAAAGAGAAGCTTGACCTGAAGTTTTTTGATGACTTCCCCGAACTTGTGCTTTATGGAGAAATGCTGGGCCCTGAC
AACCCCTATGTCCCAAAAGAGATCTACGGCATTGACTCCGTGGAGTTCTATATCTTCGATATTCGGGAAAAAAATACTGG
AAACCCTCTTCCAATAAGCAAGAAACACGAAATTCTGGAAGAATATGGTTTTTTGCAGGTTGAATGTTTTGGAGAATTTC
CCCTTCATACAGCTGCAGAACAAATTACTAAAATAATCCGGGAACTCGGGAAAAAAGAACACGAAGGAGTGGTAATAAAA
GATCCTGATATGATTCTTGCTCCCCTGAAATACACCTCATCCCAGAGCAACTGTTCTGACCTCAGGCACGCCTTCAGGTT
CTATAATGAAGCAGGCAGGGACTATATGCTCCCCAGGATTGTTAGAGAGGGGTTCCAGACGGTTGAATGGGACGAAAATG
AAGCCGAATTCAAAAAGCGTTATATGCAGCTGGGGGAAAGTATCCTGAGACCCCTGAGAGAGTCTATCCAAAGTGTAAAG
AACGGACAGAGGCTCTATGAAGAAGTCAGAATCCGTGTAAAGGACCCGAAAACTGCAACAGAATTCGAGAATTACCTCAA
AAGGCTTGGAGTGGATGCTATCTTTGAAGAACCACAGCCTATAGGAAATGAATACCTGATAAACATCAAAAAAATCAATA
AAAGCACCAATGATAAAACTCAGGCGATCTGGGAAGGAGAACTCTGGTAA

Upstream 100 bases:

>100_bases
ATTAATCTTTGTAAATTAGATAAGTCTACGCAAGTAGACAAGTTCCGAAACACTGTAAGGAATGACAACTTATTTTACGC
TCGAAAACAGATAAATAAGT

Downstream 100 bases:

>100_bases
TAGGACTCACCTGCTAATAAAGTATATTTTCCAGGTTGTCTCAAAACTATACCTGATCGCACATTTGGGTCAGAAACCCG
TAATCTTTATCTTTTTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKRGDEEIDSGFVERLAGFLGFDEERVQHLFEKIYLARNWGKHDYLFRFDKEISRIERGTVLYEKGDSFEVIMGFPKIRR
AMVLDPTLKKHFSGLEKITVEEKMNGYNVRVAKVKDDILAITRSGYICPYTTEKAKEKLDLKFFDDFPELVLYGEMLGPD
NPYVPKEIYGIDSVEFYIFDIREKNTGNPLPISKKHEILEEYGFLQVECFGEFPLHTAAEQITKIIRELGKKEHEGVVIK
DPDMILAPLKYTSSQSNCSDLRHAFRFYNEAGRDYMLPRIVREGFQTVEWDENEAEFKKRYMQLGESILRPLRESIQSVK
NGQRLYEEVRIRVKDPKTATEFENYLKRLGVDAIFEEPQPIGNEYLINIKKINKSTNDKTQAIWEGELW

Sequences:

>Translated_389_residues
MKRGDEEIDSGFVERLAGFLGFDEERVQHLFEKIYLARNWGKHDYLFRFDKEISRIERGTVLYEKGDSFEVIMGFPKIRR
AMVLDPTLKKHFSGLEKITVEEKMNGYNVRVAKVKDDILAITRSGYICPYTTEKAKEKLDLKFFDDFPELVLYGEMLGPD
NPYVPKEIYGIDSVEFYIFDIREKNTGNPLPISKKHEILEEYGFLQVECFGEFPLHTAAEQITKIIRELGKKEHEGVVIK
DPDMILAPLKYTSSQSNCSDLRHAFRFYNEAGRDYMLPRIVREGFQTVEWDENEAEFKKRYMQLGESILRPLRESIQSVK
NGQRLYEEVRIRVKDPKTATEFENYLKRLGVDAIFEEPQPIGNEYLINIKKINKSTNDKTQAIWEGELW
>Mature_389_residues
MKRGDEEIDSGFVERLAGFLGFDEERVQHLFEKIYLARNWGKHDYLFRFDKEISRIERGTVLYEKGDSFEVIMGFPKIRR
AMVLDPTLKKHFSGLEKITVEEKMNGYNVRVAKVKDDILAITRSGYICPYTTEKAKEKLDLKFFDDFPELVLYGEMLGPD
NPYVPKEIYGIDSVEFYIFDIREKNTGNPLPISKKHEILEEYGFLQVECFGEFPLHTAAEQITKIIRELGKKEHEGVVIK
DPDMILAPLKYTSSQSNCSDLRHAFRFYNEAGRDYMLPRIVREGFQTVEWDENEAEFKKRYMQLGESILRPLRESIQSVK
NGQRLYEEVRIRVKDPKTATEFENYLKRLGVDAIFEEPQPIGNEYLINIKKINKSTNDKTQAIWEGELW

Specific function: Unknown

COG id: COG1423

COG function: function code L; ATP-dependent DNA ligase, homolog of eukaryotic ligase III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012310
- InterPro:   IPR001072 [H]

Pfam domain/function: PF01068 DNA_ligase_A_M [H]

EC number: NA

Molecular weight: Translated: 45609; Mature: 45609

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGDEEIDSGFVERLAGFLGFDEERVQHLFEKIYLARNWGKHDYLFRFDKEISRIERGT
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCE
VLYEKGDSFEVIMGFPKIRRAMVLDPTLKKHFSGLEKITVEEKMNGYNVRVAKVKDDILA
EEEECCCCEEEEECCHHHHHHHHCCHHHHHHHCCHHHEEHHHHCCCCEEEEEEECCHHHH
ITRSGYICPYTTEKAKEKLDLKFFDDFPELVLYGEMLGPDNPYVPKEIYGIDSVEFYIFD
ECCCCEECCCCCHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEEE
IREKNTGNPLPISKKHEILEEYGFLQVECFGEFPLHTAAEQITKIIRELGKKEHEGVVIK
EEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCEEEE
DPDMILAPLKYTSSQSNCSDLRHAFRFYNEAGRDYMLPRIVREGFQTVEWDENEAEFKKR
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH
YMQLGESILRPLRESIQSVKNGQRLYEEVRIRVKDPKTATEFENYLKRLGVDAIFEEPQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCHHHHCCCCC
IGNEYLINIKKINKSTNDKTQAIWEGELW
CCCCEEEEEEECCCCCCCHHHEEECCCCC
>Mature Secondary Structure
MKRGDEEIDSGFVERLAGFLGFDEERVQHLFEKIYLARNWGKHDYLFRFDKEISRIERGT
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCE
VLYEKGDSFEVIMGFPKIRRAMVLDPTLKKHFSGLEKITVEEKMNGYNVRVAKVKDDILA
EEEECCCCEEEEECCHHHHHHHHCCHHHHHHHCCHHHEEHHHHCCCCEEEEEEECCHHHH
ITRSGYICPYTTEKAKEKLDLKFFDDFPELVLYGEMLGPDNPYVPKEIYGIDSVEFYIFD
ECCCCEECCCCCHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEEE
IREKNTGNPLPISKKHEILEEYGFLQVECFGEFPLHTAAEQITKIIRELGKKEHEGVVIK
EEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCEEEE
DPDMILAPLKYTSSQSNCSDLRHAFRFYNEAGRDYMLPRIVREGFQTVEWDENEAEFKKR
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH
YMQLGESILRPLRESIQSVKNGQRLYEEVRIRVKDPKTATEFENYLKRLGVDAIFEEPQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCHHHHCCCCC
IGNEYLINIKKINKSTNDKTQAIWEGELW
CCCCEEEEEEECCCCCCCHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]