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The map label for this gene is ygiQ [C]

Identifier: 21227389

GI number: 21227389

Start: 1528486

End: 1530366

Strand: Direct

Name: ygiQ [C]

Synonym: MM_1287

Alternate gene names: 21227389

Gene position: 1528486-1530366 (Clockwise)

Preceding gene: 21227388

Following gene: 21227394

Centisome position: 37.31

GC content: 47.1

Gene sequence:

>1881_bases
ATGAGCCCTGAAGAAGTAAAAGCTCGCGGCTGGAAGGAACTTGATGTTATTCTTGTCACCGGAGACGCTTACGTGGACCA
CTCCAGTTTCGGGACTGCAATAATCGGAAGGGTCCTTGAAGATGCAGGTTTCAGAGTAGGAATTATTGCCCAGCCGCGCT
GGGAAAATCCCGAAGATTTCAAAAAACTCGGAAAACCCAGACTATTCTTTTCCGTAAGCGCCGGAAATACGGATTCAATG
GTAAGCAACCTGACACCCGGACTCAAGCCACGTAATAAAGATGCATATTCCCCGGGAGGAAAAACAGGACTTCGCCCTAA
CCGCGCAGCAATTATCTATTCAAACAGAATAAAGGAAGCTTTTCCTGACATGCCTATAGTACTCGGAGGAATCGAAGCTT
CAATGCGGCGTTTTGCCCATTATGATTATCTCTCGGACAAAGTAAGGCAGTCAATTCTGGCTGATGCCCCTGCAGACCTC
GTAGTTTACGGTATGGGTGAACTCCAGATTGTAGAAATTGCAAAACGGCTTCAAGCCGGAGAGGACATAAAGGGAATCAG
AGACATCTCCGGAACTGTATGGAAAATGGAAGTTAAAGCCTGGAAAGAGCTTAAAGGAAAGGGTAAAGAAAAAGCCGGAG
AGCAGGATGAATCTGAAAATGCAACTGAGGAGGTAGCTAAGGATAAATCTCTAGACCCGGCTGAATTTTTTAAGGAATAT
GTCGAGATTCCTTCGTTCTCCGAAGTTTCCCAGGATAAAGCGGTTTTTGCAAAGGCTTTCCGCACATACTTCCTGGAACA
GAACCCTGTTACCGGAAAAGGTATTGTGCAGCCTCACCCGAAAACCATTATCATACAGAATAAGCCAATGCGCCCACTTA
CAGAAGCGGAACTTGACCATGTTTATGAACTGCCATATACAGGCGAAACCCATCCTTCTTACACCGAACCCGTACCTGCC
CTTGAGATGGTTAAATTTTCCCTGACAACGCATAGGGGCTGCTTTGGAGGCTGTTCTTTTTGCGCCATCACCCAGCATCA
GGGGCGCATGATTGCGAGCCGGAGCATCGAGTCTATACTGCGTGAAGCAAAAAAGCTTACCCAAAAACCTGATTTTAAAG
GCATAATCAACGGGGTAGGAGGTCCCACTGCCAATATGTACGGCATGGAGTGCAGATCCTGGGAGAAGAAAGGAGCCTGC
CTTGACAAAGCCTGCCTCTACCCGCGCGTCTGCCCTGCTCTGGATACAAGCCACAAAAAGCTGCTTGAATTAATGCACCG
CCTTCGTGAGCTTCCGGGAGTCAGGCATGTATTTACAGGTTACGGCGTGCGCTATGACCTTGCCCTTGAAGATGAAGAGT
ATTTAGAGGAACTCTGTGCCCACCATATTAGCGGGCAGCTCAGGATCGCGCCTGAACATTTCTCAGGAAGAGTAACCGAT
GCAATGTCCAAGCCCGGAAAGGAAGTTTATGAGAAGTTTGCAGACAGGTTTAACGCCTTTAACAAAAAATGCGGCAAAGA
ACAGTATATTGTAAACTACCTGATGTCGGGCCACCCCGGATGCACTCTTAAAGATATGATCGAAATGGCAGAGTATGTGC
GGGACCATGGAGGATATACCGAACAGGTTCAGGACTTCACTCCAACTCCTATGACAGTTTCAACCTGCATGTATTACACA
GGGCTTGACCCGTTTACAGGCAAAAAAATGTACGTTGCAAGGGATAAGAAAGAAAAAGCAATGCAAAGAGCCCTTATGCA
TTACAGGAACCCTGCAAACTACGAACTCGTATATGAGGCTCTGGAAAAGGCAGGACGGCTTGACCTTGTTGGAAATGCCC
ATAAATGCCTGATAAGGAGAAAAGAAAGGCAACGAAAGTAA

Upstream 100 bases:

>100_bases
GAAAAAAGAAGAGTCGAGACCCGGAACAAGAACCGGAAAGAAAGAAAAGAAGCAGAAAAAAAGGTTTTCCCCGCCCCTCC
CTCTTTCAAAATTTCTACCG

Downstream 100 bases:

>100_bases
AGAACTCAACAGGACAGGCTTAGCAAAAATATGCAGGCTTCAAATAAACAGGACTGAGAAGAAACGGATTTTCAGGGAAA
TTTGCGTTTTTCTCAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MSPEEVKARGWKELDVILVTGDAYVDHSSFGTAIIGRVLEDAGFRVGIIAQPRWENPEDFKKLGKPRLFFSVSAGNTDSM
VSNLTPGLKPRNKDAYSPGGKTGLRPNRAAIIYSNRIKEAFPDMPIVLGGIEASMRRFAHYDYLSDKVRQSILADAPADL
VVYGMGELQIVEIAKRLQAGEDIKGIRDISGTVWKMEVKAWKELKGKGKEKAGEQDESENATEEVAKDKSLDPAEFFKEY
VEIPSFSEVSQDKAVFAKAFRTYFLEQNPVTGKGIVQPHPKTIIIQNKPMRPLTEAELDHVYELPYTGETHPSYTEPVPA
LEMVKFSLTTHRGCFGGCSFCAITQHQGRMIASRSIESILREAKKLTQKPDFKGIINGVGGPTANMYGMECRSWEKKGAC
LDKACLYPRVCPALDTSHKKLLELMHRLRELPGVRHVFTGYGVRYDLALEDEEYLEELCAHHISGQLRIAPEHFSGRVTD
AMSKPGKEVYEKFADRFNAFNKKCGKEQYIVNYLMSGHPGCTLKDMIEMAEYVRDHGGYTEQVQDFTPTPMTVSTCMYYT
GLDPFTGKKMYVARDKKEKAMQRALMHYRNPANYELVYEALEKAGRLDLVGNAHKCLIRRKERQRK

Sequences:

>Translated_626_residues
MSPEEVKARGWKELDVILVTGDAYVDHSSFGTAIIGRVLEDAGFRVGIIAQPRWENPEDFKKLGKPRLFFSVSAGNTDSM
VSNLTPGLKPRNKDAYSPGGKTGLRPNRAAIIYSNRIKEAFPDMPIVLGGIEASMRRFAHYDYLSDKVRQSILADAPADL
VVYGMGELQIVEIAKRLQAGEDIKGIRDISGTVWKMEVKAWKELKGKGKEKAGEQDESENATEEVAKDKSLDPAEFFKEY
VEIPSFSEVSQDKAVFAKAFRTYFLEQNPVTGKGIVQPHPKTIIIQNKPMRPLTEAELDHVYELPYTGETHPSYTEPVPA
LEMVKFSLTTHRGCFGGCSFCAITQHQGRMIASRSIESILREAKKLTQKPDFKGIINGVGGPTANMYGMECRSWEKKGAC
LDKACLYPRVCPALDTSHKKLLELMHRLRELPGVRHVFTGYGVRYDLALEDEEYLEELCAHHISGQLRIAPEHFSGRVTD
AMSKPGKEVYEKFADRFNAFNKKCGKEQYIVNYLMSGHPGCTLKDMIEMAEYVRDHGGYTEQVQDFTPTPMTVSTCMYYT
GLDPFTGKKMYVARDKKEKAMQRALMHYRNPANYELVYEALEKAGRLDLVGNAHKCLIRRKERQRK
>Mature_625_residues
SPEEVKARGWKELDVILVTGDAYVDHSSFGTAIIGRVLEDAGFRVGIIAQPRWENPEDFKKLGKPRLFFSVSAGNTDSMV
SNLTPGLKPRNKDAYSPGGKTGLRPNRAAIIYSNRIKEAFPDMPIVLGGIEASMRRFAHYDYLSDKVRQSILADAPADLV
VYGMGELQIVEIAKRLQAGEDIKGIRDISGTVWKMEVKAWKELKGKGKEKAGEQDESENATEEVAKDKSLDPAEFFKEYV
EIPSFSEVSQDKAVFAKAFRTYFLEQNPVTGKGIVQPHPKTIIIQNKPMRPLTEAELDHVYELPYTGETHPSYTEPVPAL
EMVKFSLTTHRGCFGGCSFCAITQHQGRMIASRSIESILREAKKLTQKPDFKGIINGVGGPTANMYGMECRSWEKKGACL
DKACLYPRVCPALDTSHKKLLELMHRLRELPGVRHVFTGYGVRYDLALEDEEYLEELCAHHISGQLRIAPEHFSGRVTDA
MSKPGKEVYEKFADRFNAFNKKCGKEQYIVNYLMSGHPGCTLKDMIEMAEYVRDHGGYTEQVQDFTPTPMTVSTCMYYTG
LDPFTGKKMYVARDKKEKAMQRALMHYRNPANYELVYEALEKAGRLDLVGNAHKCLIRRKERQRK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family

Homologues:

Organism=Escherichia coli, GI48994917, Length=645, Percent_Identity=42.9457364341085, Blast_Score=565, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1287_METMA (Q8PXD4)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_633311.1
- ProteinModelPortal:   Q8PXD4
- GeneID:   1479629
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_1287
- NMPDR:   fig|192952.1.peg.1287
- HOGENOM:   HBG500854
- OMA:   FLPMSRA
- ProtClustDB:   PRK00955
- BioCyc:   MMAZ192952:MM1287-MONOMER
- HAMAP:   MF_01251
- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946
- SMART:   SM00729

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N

EC number: NA

Molecular weight: Translated: 70605; Mature: 70474

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00217 SUGAR_TRANSPORT_2 ; PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPEEVKARGWKELDVILVTGDAYVDHSSFGTAIIGRVLEDAGFRVGIIAQPRWENPEDF
CCCHHHHHCCCCEEEEEEEECCCEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
KKLGKPRLFFSVSAGNTDSMVSNLTPGLKPRNKDAYSPGGKTGLRPNRAAIIYSNRIKEA
HHCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
FPDMPIVLGGIEASMRRFAHYDYLSDKVRQSILADAPADLVVYGMGELQIVEIAKRLQAG
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCC
EDIKGIRDISGTVWKMEVKAWKELKGKGKEKAGEQDESENATEEVAKDKSLDPAEFFKEY
CCCCHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
VEIPSFSEVSQDKAVFAKAFRTYFLEQNPVTGKGIVQPHPKTIIIQNKPMRPLTEAELDH
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHH
VYELPYTGETHPSYTEPVPALEMVKFSLTTHRGCFGGCSFCAITQHQGRMIASRSIESIL
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
REAKKLTQKPDFKGIINGVGGPTANMYGMECRSWEKKGACLDKACLYPRVCPALDTSHKK
HHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHCHHHCCCHHHHHHCCCHHCCCCCCCHHH
LLELMHRLRELPGVRHVFTGYGVRYDLALEDEEYLEELCAHHISGQLRIAPEHFSGRVTD
HHHHHHHHHHCCCCHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCEEECCHHHCCCHHH
AMSKPGKEVYEKFADRFNAFNKKCGKEQYIVNYLMSGHPGCTLKDMIEMAEYVRDHGGYT
HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH
EQVQDFTPTPMTVSTCMYYTGLDPFTGKKMYVARDKKEKAMQRALMHYRNPANYELVYEA
HHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHH
LEKAGRLDLVGNAHKCLIRRKERQRK
HHHCCCEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPEEVKARGWKELDVILVTGDAYVDHSSFGTAIIGRVLEDAGFRVGIIAQPRWENPEDF
CCHHHHHCCCCEEEEEEEECCCEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
KKLGKPRLFFSVSAGNTDSMVSNLTPGLKPRNKDAYSPGGKTGLRPNRAAIIYSNRIKEA
HHCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
FPDMPIVLGGIEASMRRFAHYDYLSDKVRQSILADAPADLVVYGMGELQIVEIAKRLQAG
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCC
EDIKGIRDISGTVWKMEVKAWKELKGKGKEKAGEQDESENATEEVAKDKSLDPAEFFKEY
CCCCHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
VEIPSFSEVSQDKAVFAKAFRTYFLEQNPVTGKGIVQPHPKTIIIQNKPMRPLTEAELDH
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHH
VYELPYTGETHPSYTEPVPALEMVKFSLTTHRGCFGGCSFCAITQHQGRMIASRSIESIL
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
REAKKLTQKPDFKGIINGVGGPTANMYGMECRSWEKKGACLDKACLYPRVCPALDTSHKK
HHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHCHHHCCCHHHHHHCCCHHCCCCCCCHHH
LLELMHRLRELPGVRHVFTGYGVRYDLALEDEEYLEELCAHHISGQLRIAPEHFSGRVTD
HHHHHHHHHHCCCCHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCEEECCHHHCCCHHH
AMSKPGKEVYEKFADRFNAFNKKCGKEQYIVNYLMSGHPGCTLKDMIEMAEYVRDHGGYT
HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH
EQVQDFTPTPMTVSTCMYYTGLDPFTGKKMYVARDKKEKAMQRALMHYRNPANYELVYEA
HHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHH
LEKAGRLDLVGNAHKCLIRRKERQRK
HHHCCCEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12125824