Click here to switch to the map view.

The map label for this gene is yneB [C]

Identifier: 21227373

GI number: 21227373

Start: 1505915

End: 1506718

Strand: Direct

Name: yneB [C]

Synonym: MM_1271

Alternate gene names: 21227373

Gene position: 1505915-1506718 (Clockwise)

Preceding gene: 21227371

Following gene: 21227374

Centisome position: 36.76

GC content: 49.75

Gene sequence:

>804_bases
ATGACGATGTCTGAAATTGGCAAAAAGATCCGTATAGAAAGGCTGATGAATCGTGAGAGCAGAAACATGGTAATTATTCC
GCTGGACCATGGAATCTCTGACGGACCTATTGAAGGGCTTATTAATATTACCGATACAGTTAATAGGGTTGCCGAAGGAG
GAGCAAATGCAGTTCTCATGCAGAAGGGCATGGTCAGGTACGGACATAGAGGATACGGCCACGATATCGGGCTTGTTGTG
CATATCAGTGCCTCTTCTGTCCTGAGCCCGGACCCCAATGCCAAAGTGCAGGTCTGTACCGTTGAAGAAGTAATTAAGAT
GGGAGCTGATGCAGTTTCCATGCATATCAACGTGGGATCTGATACAGAAGCCGACCAGCTTGAAATGCTCGGGAAAATCT
CAAGGGACTGTACGGAATGGGGTATGCCTCTTCTTGCCATGATGTACCCGAGAGGCAAAAAGATCACAAACCCACATGAC
CCGGTAAATGTGGCACACGCTGCAAGAATTGGAGCCGAACTCGGGGCTGATGTTGTGAAAACCGTATACACCGGAGACCC
TGACAGTTTCAGGGATGTTGTGAGGGGCTGTCCTGTGCCTGTGGTAATTGCAGGCGGGCCGAAGACCTCTACCGACATGG
AACTTCTTGAAATGATTGACGGGGCAATGGAAGCCGGAGCAAGAGGAGCTGCAATAGGAAGAAATGTCTTCCAGCACGGG
GACCCTGTCAGGCTGACCAGGGCTATCTGCGAAATCGTTCACCACAGAAGGCCTGTAGAAGAAGCTCTGGAGCAGCTAAA
ATAA

Upstream 100 bases:

>100_bases
TCTGTGCTAGTATGTCACACACTAGCACGCTAGAAAAGAGTAAAGGTTAGAAAATCAGGAAAAAATAAACAGATAAAGTT
AATCAGTTTAGAATAGGGGA

Downstream 100 bases:

>100_bases
AAATATTGAATAAAAATATTGAATAAAAAAGGCCCGCTGTGAAAAAGACACAGAATGAAGGATTCCCAAGCAGGGTTTCG
GAGAATGTACCGGAATAAAT

Product: fructose-bisphosphate aldolase

Products: 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MTMSEIGKKIRIERLMNRESRNMVIIPLDHGISDGPIEGLINITDTVNRVAEGGANAVLMQKGMVRYGHRGYGHDIGLVV
HISASSVLSPDPNAKVQVCTVEEVIKMGADAVSMHINVGSDTEADQLEMLGKISRDCTEWGMPLLAMMYPRGKKITNPHD
PVNVAHAARIGAELGADVVKTVYTGDPDSFRDVVRGCPVPVVIAGGPKTSTDMELLEMIDGAMEAGARGAAIGRNVFQHG
DPVRLTRAICEIVHHRRPVEEALEQLK

Sequences:

>Translated_267_residues
MTMSEIGKKIRIERLMNRESRNMVIIPLDHGISDGPIEGLINITDTVNRVAEGGANAVLMQKGMVRYGHRGYGHDIGLVV
HISASSVLSPDPNAKVQVCTVEEVIKMGADAVSMHINVGSDTEADQLEMLGKISRDCTEWGMPLLAMMYPRGKKITNPHD
PVNVAHAARIGAELGADVVKTVYTGDPDSFRDVVRGCPVPVVIAGGPKTSTDMELLEMIDGAMEAGARGAAIGRNVFQHG
DPVRLTRAICEIVHHRRPVEEALEQLK
>Mature_266_residues
TMSEIGKKIRIERLMNRESRNMVIIPLDHGISDGPIEGLINITDTVNRVAEGGANAVLMQKGMVRYGHRGYGHDIGLVVH
ISASSVLSPDPNAKVQVCTVEEVIKMGADAVSMHINVGSDTEADQLEMLGKISRDCTEWGMPLLAMMYPRGKKITNPHDP
VNVAHAARIGAELGADVVKTVYTGDPDSFRDVVRGCPVPVVIAGGPKTSTDMELLEMIDGAMEAGARGAAIGRNVFQHGD
PVRLTRAICEIVHHRRPVEEALEQLK

Specific function: Unknown

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1787796, Length=260, Percent_Identity=30, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR010210
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: 2.5.1.54

Molecular weight: Translated: 28872; Mature: 28741

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSEIGKKIRIERLMNRESRNMVIIPLDHGISDGPIEGLINITDTVNRVAEGGANAVLM
CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHEEEHHHHHHHHHCCCCCEEHH
QKGMVRYGHRGYGHDIGLVVHISASSVLSPDPNAKVQVCTVEEVIKMGADAVSMHINVGS
HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHCCCCEEEEEEECCC
DTEADQLEMLGKISRDCTEWGMPLLAMMYPRGKKITNPHDPVNVAHAARIGAELGADVVK
CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TVYTGDPDSFRDVVRGCPVPVVIAGGPKTSTDMELLEMIDGAMEAGARGAAIGRNVFQHG
HHHCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
DPVRLTRAICEIVHHRRPVEEALEQLK
CHHHHHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
TMSEIGKKIRIERLMNRESRNMVIIPLDHGISDGPIEGLINITDTVNRVAEGGANAVLM
CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHEEEHHHHHHHHHCCCCCEEHH
QKGMVRYGHRGYGHDIGLVVHISASSVLSPDPNAKVQVCTVEEVIKMGADAVSMHINVGS
HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHCCCCEEEEEEECCC
DTEADQLEMLGKISRDCTEWGMPLLAMMYPRGKKITNPHDPVNVAHAARIGAELGADVVK
CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TVYTGDPDSFRDVVRGCPVPVVIAGGPKTSTDMELLEMIDGAMEAGARGAAIGRNVFQHG
HHHCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
DPVRLTRAICEIVHHRRPVEEALEQLK
CHHHHHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: phosphoenolpyruvate; D-erythrose 4-phosphate; H2O

Specific reaction: phosphoenolpyruvate + D-erythrose 4-phosphate + H2O = 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]