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The map label for this gene is 21227356

Identifier: 21227356

GI number: 21227356

Start: 1489369

End: 1489866

Strand: Reverse

Name: 21227356

Synonym: MM_1254

Alternate gene names: NA

Gene position: 1489866-1489369 (Counterclockwise)

Preceding gene: 21227357

Following gene: 21227355

Centisome position: 36.37

GC content: 43.17

Gene sequence:

>498_bases
ATGGTGGGCATAAGAAAAAGAAAGGATTTCTTTGAAGACTTTGGGTCTGAACTTTTTGACAACCTGGAAGAGATTATCGA
AGCCCTCCTGGAAGAAATGGGAGAATCCGGCCCCTTTGTTTACGGATTTTCTATCATTCACCGCCCGGGGGAAGATCCCG
AACTCCGGGAATTCGGAAACGTTCCGGAATACCCTCAAAAAGAAGAGAACTTCTTTCCTTCAGAAACAAAAGAACCTTTA
ATTGATATCTTCGAAAACGAAGATATGGTGCACGTACTTGCAGAATTCCCAGAAATCGAAAAGGAAAACCTTCTGCTGCA
TGCGACTGCCCAGAACCTTGAAATTAAAGTCACAGGGCTTTCTGAATTTTCGGAAGATGTGGAACTTCCTGTTCCAGTGG
ACCCGAAGAGTGCAAAAGCCAGCTATAAAAATGGGGTGCTTGAAGTTATCTTCAGGCGCTGTGTTGAAGAAAAACCAGTT
GAAATTAAGATCAGCTAA

Upstream 100 bases:

>100_bases
CGGCGTCCTGGAGGTTACCTTTAACAAAATGGAGTCCAGTTCTCGAACTTCAATCAATATTGAGTGATCTTCGGGAGCGT
GAGGAAAATAAGAGGTAATA

Downstream 100 bases:

>100_bases
TATTTATCAACCCTATATATTTTTTAAGGGTTATATAATGCAGTCTGGAACTGTGAATAATTTCAAGCTCGAACTGCAGA
TTCGAGAGAAAATTTGAAGC

Product: putative heat shock protein

Products: NA

Alternate protein names: Small Heat Shock Protein; Heat Shock Protein; Hsp20/Alpha Crystallin Family Protein; Small Heat Shock Protein Hsp; Heat Shock Protein HSP; Chaperonin Hsp

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MVGIRKRKDFFEDFGSELFDNLEEIIEALLEEMGESGPFVYGFSIIHRPGEDPELREFGNVPEYPQKEENFFPSETKEPL
IDIFENEDMVHVLAEFPEIEKENLLLHATAQNLEIKVTGLSEFSEDVELPVPVDPKSAKASYKNGVLEVIFRRCVEEKPV
EIKIS

Sequences:

>Translated_165_residues
MVGIRKRKDFFEDFGSELFDNLEEIIEALLEEMGESGPFVYGFSIIHRPGEDPELREFGNVPEYPQKEENFFPSETKEPL
IDIFENEDMVHVLAEFPEIEKENLLLHATAQNLEIKVTGLSEFSEDVELPVPVDPKSAKASYKNGVLEVIFRRCVEEKPV
EIKIS
>Mature_165_residues
MVGIRKRKDFFEDFGSELFDNLEEIIEALLEEMGESGPFVYGFSIIHRPGEDPELREFGNVPEYPQKEENFFPSETKEPL
IDIFENEDMVHVLAEFPEIEKENLLLHATAQNLEIKVTGLSEFSEDVELPVPVDPKSAKASYKNGVLEVIFRRCVEEKPV
EIKIS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18949; Mature: 18949

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGIRKRKDFFEDFGSELFDNLEEIIEALLEEMGESGPFVYGFSIIHRPGEDPELREFGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHCC
VPEYPQKEENFFPSETKEPLIDIFENEDMVHVLAEFPEIEKENLLLHATAQNLEIKVTGL
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCEEEEEECC
SEFSEDVELPVPVDPKSAKASYKNGVLEVIFRRCVEEKPVEIKIS
HHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MVGIRKRKDFFEDFGSELFDNLEEIIEALLEEMGESGPFVYGFSIIHRPGEDPELREFGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHCC
VPEYPQKEENFFPSETKEPLIDIFENEDMVHVLAEFPEIEKENLLLHATAQNLEIKVTGL
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCEEEEEECC
SEFSEDVELPVPVDPKSAKASYKNGVLEVIFRRCVEEKPVEIKIS
HHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA