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The map label for this gene is mcrC [H]

Identifier: 21227344

GI number: 21227344

Start: 1470628

End: 1471248

Strand: Reverse

Name: mcrC [H]

Synonym: MM_1242

Alternate gene names: 21227344

Gene position: 1471248-1470628 (Counterclockwise)

Preceding gene: 21227345

Following gene: 21227343

Centisome position: 35.92

GC content: 45.73

Gene sequence:

>621_bases
ATGATGTTTGACCGGGAAACACAGGTGGTTGATTGCCGATGCGGTGGAGGACTTGGCAAAGGAGGAGGACTTGCTCAAAG
AGGCACTCTTTCGGAAGCCGGTCGTGCCGACGTTGTAGCTGTTGCCATGAGTCCCGGACAGAGGCATATCACAAAACCGG
TATGTGAGATTACATACGGCATGAGGAAAGAAAACATTCAGGTGAGTGTGCTTGTACTTTACTCAGGTTCAGGTATCCCG
GAATCAGGCATGAGGACAGGATCATTTGTATTGAGTCCGGTAGAAGTCGCACAGATCGAAATGCACAAGCTGGCTGTTAT
TCACCTCGGGAATATCAAAGACCATGTAATCAGAAAAACCAGAGAAATTTTGAGCCAGGTAGACATACCGGCAATCATAG
TCAGCCAGATTCCGGTGGATTTTGAGGATTTTGCAGAAGCAGGGATAAAGACGAGATTAGTGATGCCAAGGGATGAAAAC
ATCCGTACCAAAGGAATTGTGATGGATATGGTAAGTGGGGTTACACGCGGTGACTCCTGTCCCAGGGATAAACTAAATTT
AATAGTAAAATACGTCAAGACGACATTAGACCAGTTAAAAGATCATAAAGGAGTTGCATGA

Upstream 100 bases:

>100_bases
CTTGCTTGGTATGGTAGATCCCAAAGCCAAAATAAACCAGCTTGTCTTCATTGAGAAACAAGAGAAAGAAGACGATGAAG
ATAAAGATGAGTGAAAAGAT

Downstream 100 bases:

>100_bases
GATGGCATACGAATCACAGTATTACCCAGGCGCTACATCTGTCGGCGCTAACAGAAGAAAGCACATGTCCGGAAAACTTG
AGAAACTCAGGGAAATTTCC

Product: methyl-coenzyme M reductase operon protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MMFDRETQVVDCRCGGGLGKGGGLAQRGTLSEAGRADVVAVAMSPGQRHITKPVCEITYGMRKENIQVSVLVLYSGSGIP
ESGMRTGSFVLSPVEVAQIEMHKLAVIHLGNIKDHVIRKTREILSQVDIPAIIVSQIPVDFEDFAEAGIKTRLVMPRDEN
IRTKGIVMDMVSGVTRGDSCPRDKLNLIVKYVKTTLDQLKDHKGVA

Sequences:

>Translated_206_residues
MMFDRETQVVDCRCGGGLGKGGGLAQRGTLSEAGRADVVAVAMSPGQRHITKPVCEITYGMRKENIQVSVLVLYSGSGIP
ESGMRTGSFVLSPVEVAQIEMHKLAVIHLGNIKDHVIRKTREILSQVDIPAIIVSQIPVDFEDFAEAGIKTRLVMPRDEN
IRTKGIVMDMVSGVTRGDSCPRDKLNLIVKYVKTTLDQLKDHKGVA
>Mature_206_residues
MMFDRETQVVDCRCGGGLGKGGGLAQRGTLSEAGRADVVAVAMSPGQRHITKPVCEITYGMRKENIQVSVLVLYSGSGIP
ESGMRTGSFVLSPVEVAQIEMHKLAVIHLGNIKDHVIRKTREILSQVDIPAIIVSQIPVDFEDFAEAGIKTRLVMPRDEN
IRTKGIVMDMVSGVTRGDSCPRDKLNLIVKYVKTTLDQLKDHKGVA

Specific function: Unknown

COG id: COG4056

COG function: function code H; Methyl coenzyme M reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007687 [H]

Pfam domain/function: PF04609 MCR_C [H]

EC number: NA

Molecular weight: Translated: 22428; Mature: 22428

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFDRETQVVDCRCGGGLGKGGGLAQRGTLSEAGRADVVAVAMSPGQRHITKPVCEITYG
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHC
MRKENIQVSVLVLYSGSGIPESGMRTGSFVLSPVEVAQIEMHKLAVIHLGNIKDHVIRKT
CCCCCEEEEEEEEEECCCCCCCCCCCCCEEECHHHHHHHHHHEEEEEEECCHHHHHHHHH
REILSQVDIPAIIVSQIPVDFEDFAEAGIKTRLVMPRDENIRTKGIVMDMVSGVTRGDSC
HHHHHHCCCCEEEEHHCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCC
PRDKLNLIVKYVKTTLDQLKDHKGVA
CHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMFDRETQVVDCRCGGGLGKGGGLAQRGTLSEAGRADVVAVAMSPGQRHITKPVCEITYG
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHC
MRKENIQVSVLVLYSGSGIPESGMRTGSFVLSPVEVAQIEMHKLAVIHLGNIKDHVIRKT
CCCCCEEEEEEEEEECCCCCCCCCCCCCEEECHHHHHHHHHHEEEEEEECCHHHHHHHHH
REILSQVDIPAIIVSQIPVDFEDFAEAGIKTRLVMPRDENIRTKGIVMDMVSGVTRGDSC
HHHHHHCCCCEEEEHHCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCC
PRDKLNLIVKYVKTTLDQLKDHKGVA
CHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3502709 [H]