Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227335

Identifier: 21227335

GI number: 21227335

Start: 1460306

End: 1461124

Strand: Reverse

Name: 21227335

Synonym: MM_1233

Alternate gene names: NA

Gene position: 1461124-1460306 (Counterclockwise)

Preceding gene: 21227342

Following gene: 21227334

Centisome position: 35.67

GC content: 35.41

Gene sequence:

>819_bases
ATGAATACAGCCAAAGAATCTAAAAAACTTATAAAATATAAACCAGGTAAAGAATATATAGCGACTATTCAGTGTACACT
CTCTTCAACCACCCACACAATTACCTATAAAGGCGATCTTAAAGAAGGCTTCTTCCTTAAAGACTTAGCTCCTGGTTTAA
TCAAAATTTTTGGTAAATCTTTTACTTCTGCTGTCGGAGAAATTCCCAATTCCTTATTTGCCATAATATTCTTTATAGTG
TCTTTTTTTTTCTCGGCATTCTTTCTCTCGGTAGCAAATTATTATACTTCTGAAAGGGGCATTTTATTAGCTATTCTTCT
TAGCGGTTTTGTAATTACCACTGCAGTGCCTTTAAAACTTCAGTACTATTATATTGCAGAATATTACAGAAATACTGTAT
GTAATAACTGCGGAAAAGAGTTTATCTGCCGTGAAACAGAAAAACCGGATATTAAGGAAATAAGCACTCCAGAAACTTAC
AGAATACAGATTACCCGCTATTGGAGTTGCAGATCCTGCGGATATATGAATGTTCGAGAGAGTTCTGAAGGTTTCGTTAC
AAAAAAAGGAAAAACAATGAAAGTCTCTGACCTGGCAAAGGTTCAATGTAAAAGATGCGGCAAAACCGGTACATATATTG
AATATAAAAAACCGGACATACGGGTGTCTAAAGAGCAAGAAACCATGGAAAGACGATATTACAGATGTAAGCTCTGCAAC
TACGAAGATATTGCAGCAACCGAGTTTTTTATGGTTCCAGATAGTGGTGGCGTTTCTGCAATAGAATGGAATATCGATTA
TGAGGATTACTTTGGTTAA

Upstream 100 bases:

>100_bases
GTTAAACTCTTACTCCTAAAATTTAAATAGTTGTAAATGTTGTATCATTTGAAAACATGTATTCTTTTTTATCTGTTTTT
AGTAAGCTGGGTTGGGTAAG

Downstream 100 bases:

>100_bases
ATATCTTATTTGTTAAATTATTGATGAGCCTCTCTGAAATTTTAATTTTTGATTAGTATCCAATACAAGACTGCCCTCCA
GCAAAATTCCTTAAGATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNTAKESKKLIKYKPGKEYIATIQCTLSSTTHTITYKGDLKEGFFLKDLAPGLIKIFGKSFTSAVGEIPNSLFAIIFFIV
SFFFSAFFLSVANYYTSERGILLAILLSGFVITTAVPLKLQYYYIAEYYRNTVCNNCGKEFICRETEKPDIKEISTPETY
RIQITRYWSCRSCGYMNVRESSEGFVTKKGKTMKVSDLAKVQCKRCGKTGTYIEYKKPDIRVSKEQETMERRYYRCKLCN
YEDIAATEFFMVPDSGGVSAIEWNIDYEDYFG

Sequences:

>Translated_272_residues
MNTAKESKKLIKYKPGKEYIATIQCTLSSTTHTITYKGDLKEGFFLKDLAPGLIKIFGKSFTSAVGEIPNSLFAIIFFIV
SFFFSAFFLSVANYYTSERGILLAILLSGFVITTAVPLKLQYYYIAEYYRNTVCNNCGKEFICRETEKPDIKEISTPETY
RIQITRYWSCRSCGYMNVRESSEGFVTKKGKTMKVSDLAKVQCKRCGKTGTYIEYKKPDIRVSKEQETMERRYYRCKLCN
YEDIAATEFFMVPDSGGVSAIEWNIDYEDYFG
>Mature_272_residues
MNTAKESKKLIKYKPGKEYIATIQCTLSSTTHTITYKGDLKEGFFLKDLAPGLIKIFGKSFTSAVGEIPNSLFAIIFFIV
SFFFSAFFLSVANYYTSERGILLAILLSGFVITTAVPLKLQYYYIAEYYRNTVCNNCGKEFICRETEKPDIKEISTPETY
RIQITRYWSCRSCGYMNVRESSEGFVTKKGKTMKVSDLAKVQCKRCGKTGTYIEYKKPDIRVSKEQETMERRYYRCKLCN
YEDIAATEFFMVPDSGGVSAIEWNIDYEDYFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31272; Mature: 31272

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAKESKKLIKYKPGKEYIATIQCTLSSTTHTITYKGDLKEGFFLKDLAPGLIKIFGKS
CCCHHHHHHHEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
FTSAVGEIPNSLFAIIFFIVSFFFSAFFLSVANYYTSERGILLAILLSGFVITTAVPLKL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEE
QYYYIAEYYRNTVCNNCGKEFICRETEKPDIKEISTPETYRIQITRYWSCRSCGYMNVRE
EEEHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEECC
SSEGFVTKKGKTMKVSDLAKVQCKRCGKTGTYIEYKKPDIRVSKEQETMERRYYRCKLCN
CCCCEEECCCCEEEHHHHHHHHHHHCCCCCCEEEECCCCCEECCHHHHHHHHHHEEEECC
YEDIAATEFFMVPDSGGVSAIEWNIDYEDYFG
CCCCCCEEEEEECCCCCCEEEEEECCHHHHCC
>Mature Secondary Structure
MNTAKESKKLIKYKPGKEYIATIQCTLSSTTHTITYKGDLKEGFFLKDLAPGLIKIFGKS
CCCHHHHHHHEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
FTSAVGEIPNSLFAIIFFIVSFFFSAFFLSVANYYTSERGILLAILLSGFVITTAVPLKL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEE
QYYYIAEYYRNTVCNNCGKEFICRETEKPDIKEISTPETYRIQITRYWSCRSCGYMNVRE
EEEHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEECC
SSEGFVTKKGKTMKVSDLAKVQCKRCGKTGTYIEYKKPDIRVSKEQETMERRYYRCKLCN
CCCCEEECCCCEEEHHHHHHHHHHHCCCCCCEEEECCCCCEECCHHHHHHHHHHEEEECC
YEDIAATEFFMVPDSGGVSAIEWNIDYEDYFG
CCCCCCEEEEEECCCCCCEEEEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA