| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227290
Identifier: 21227290
GI number: 21227290
Start: 1412740
End: 1412937
Strand: Reverse
Name: 21227290
Synonym: MM_1188
Alternate gene names: NA
Gene position: 1412937-1412740 (Counterclockwise)
Preceding gene: 21227293
Following gene: 21227289
Centisome position: 34.49
GC content: 43.94
Gene sequence:
>198_bases ATGGTTACAAGTCCCGGGATCCCTCAATATGGTGCTGCGGTGGTTGTAGGGCTCATAAGCCTTCTTTCTTTGAAGGAGAT CCTTTCAGCATCCGAGCACTGGAACAGATCACTGGACAGTTCTTTTAATATGACAATTCTGCCTTTGCTGTTCAGCTTTG CTGCAATTGTCGTTTACAAAGTAACCGGAGTAATTTAA
Upstream 100 bases:
>100_bases TGAAACTAATCAATTATTTATGGGAGGTATACTTATGCTGCTAAGCATAATTTCATCAAGTGCTATTTCCTCGAGTGCAA TTTCCTCAAGTGCAATCTCT
Downstream 100 bases:
>100_bases ATTCCGCATTTCCGGAATCATTCTCTTTTTTGCCGCATCAGACAGGTTTCGTGCAACTTTGCACTATTATTTTTTTAATT ACTTTCTGATTTATCTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MVTSPGIPQYGAAVVVGLISLLSLKEILSASEHWNRSLDSSFNMTILPLLFSFAAIVVYKVTGVI
Sequences:
>Translated_65_residues MVTSPGIPQYGAAVVVGLISLLSLKEILSASEHWNRSLDSSFNMTILPLLFSFAAIVVYKVTGVI >Mature_65_residues MVTSPGIPQYGAAVVVGLISLLSLKEILSASEHWNRSLDSSFNMTILPLLFSFAAIVVYKVTGVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6966; Mature: 6966
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSPGIPQYGAAVVVGLISLLSLKEILSASEHWNRSLDSSFNMTILPLLFSFAAIVVYK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHH VTGVI HHHCC >Mature Secondary Structure MVTSPGIPQYGAAVVVGLISLLSLKEILSASEHWNRSLDSSFNMTILPLLFSFAAIVVYK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHH VTGVI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA