Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227279

Identifier: 21227279

GI number: 21227279

Start: 1396568

End: 1397659

Strand: Reverse

Name: 21227279

Synonym: MM_1177

Alternate gene names: NA

Gene position: 1397659-1396568 (Counterclockwise)

Preceding gene: 21227280

Following gene: 21227278

Centisome position: 34.12

GC content: 31.5

Gene sequence:

>1092_bases
ATGGCACATAATGTAGGGTTTCATATGAGTTCTCAGGTCAGCAAAAATTATAAAGTACTCCACTTAGGAGATCAAGCTTT
TGTAGGATATAACCTTGTAAAGTTACTTCAAAAAAATGGAATTAAAGCTGATTACTTAGCGTACAAAAACTCTCAAATGC
ACTACAATGAAGATGGGTGTTTTTTTTTCAAAGCAAATTCCTCTGAAAGATTTAATAAAATAAAAATTATTCGTGAGAGT
CTTTCCCATTTTGAAGGCTATGATATTATACATGCTCATTCTGTTTTTTCTGTACCCTTGTTGTTATCAAAAAACAGACC
GTACGCATTACACTTACATGGGAGTGATATAAGGGTATACGCAAGAAAAAACGACCTTTTAGGTTTTGGATTAAGAAAGT
TAGTAAATAAAGCAAAAAAGATTTTTGTATCAACTCCTGATCTTTTAATGGATGTAAGTAGTTTTGGAAAAAACGCAACC
TTTTTGCCAAATCCTGTAGATTTTGAAAGGTTTTATCCAAAAAAACCAGAAATTGATCTTCAAGAAGGGTTTGATTTTAT
AATATTTCACCCAACAAGACACTCTCTCAACAAAGGAAATCAAATATTTATAAAATCATTTTCAGAGATAATTTCACAAG
GTTATAACGCTAAACTTGTTATGGTTGAGTGGGGAGATTTACTTCATGAATCAAAAAATTTGGTTCATAAATTGAATATT
AGTAAAAATGTAGAATGGATAAAATCAATTCCTCCTTATGAAATGGCCGACTATTATAACGCTAGTGATTTAGTATTCGA
TCAATTTCATTTGAAAGGACTTGGACTAGTTAGTTTTGAAGCAATGGCTTGTGGAAAGCTAACCATTACAAAATATTCTC
CTGAATACCTCAAACAAGGATATTCTATTAATCCCCCGTTATCAATTATAGATGAAGAAGTAAAGTTAACTCAAGAAGTC
ATATCGTTTTTAGATGATGCCCGACATCGAAAAAAGATGGGTTCAGCATGTCTAAACTGGGTAAAAGAAGAGCATTCAAG
TTCAAAAATATTATCCATATTAAAGCAATCATATGATGAGATACAGGGTTGA

Upstream 100 bases:

>100_bases
CTTTTAGATTCTGATATTCGGGAATGTATGAGTATGAAAGCTCGACAAGTTGCAGAATCTTATAGCTGGCGCAATATATC
CATGATGTTTGAAAGTCTAT

Downstream 100 bases:

>100_bases
TTTTTGATGCAGGATGTACTAGTAATTTTTGCATTTTTTATTATTCTTCTATCCATAGTTATAGCTTTAATTAAGGATTT
AAGCTCATGGGTCTATATAA

Product: glycosyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MAHNVGFHMSSQVSKNYKVLHLGDQAFVGYNLVKLLQKNGIKADYLAYKNSQMHYNEDGCFFFKANSSERFNKIKIIRES
LSHFEGYDIIHAHSVFSVPLLLSKNRPYALHLHGSDIRVYARKNDLLGFGLRKLVNKAKKIFVSTPDLLMDVSSFGKNAT
FLPNPVDFERFYPKKPEIDLQEGFDFIIFHPTRHSLNKGNQIFIKSFSEIISQGYNAKLVMVEWGDLLHESKNLVHKLNI
SKNVEWIKSIPPYEMADYYNASDLVFDQFHLKGLGLVSFEAMACGKLTITKYSPEYLKQGYSINPPLSIIDEEVKLTQEV
ISFLDDARHRKKMGSACLNWVKEEHSSSKILSILKQSYDEIQG

Sequences:

>Translated_363_residues
MAHNVGFHMSSQVSKNYKVLHLGDQAFVGYNLVKLLQKNGIKADYLAYKNSQMHYNEDGCFFFKANSSERFNKIKIIRES
LSHFEGYDIIHAHSVFSVPLLLSKNRPYALHLHGSDIRVYARKNDLLGFGLRKLVNKAKKIFVSTPDLLMDVSSFGKNAT
FLPNPVDFERFYPKKPEIDLQEGFDFIIFHPTRHSLNKGNQIFIKSFSEIISQGYNAKLVMVEWGDLLHESKNLVHKLNI
SKNVEWIKSIPPYEMADYYNASDLVFDQFHLKGLGLVSFEAMACGKLTITKYSPEYLKQGYSINPPLSIIDEEVKLTQEV
ISFLDDARHRKKMGSACLNWVKEEHSSSKILSILKQSYDEIQG
>Mature_362_residues
AHNVGFHMSSQVSKNYKVLHLGDQAFVGYNLVKLLQKNGIKADYLAYKNSQMHYNEDGCFFFKANSSERFNKIKIIRESL
SHFEGYDIIHAHSVFSVPLLLSKNRPYALHLHGSDIRVYARKNDLLGFGLRKLVNKAKKIFVSTPDLLMDVSSFGKNATF
LPNPVDFERFYPKKPEIDLQEGFDFIIFHPTRHSLNKGNQIFIKSFSEIISQGYNAKLVMVEWGDLLHESKNLVHKLNIS
KNVEWIKSIPPYEMADYYNASDLVFDQFHLKGLGLVSFEAMACGKLTITKYSPEYLKQGYSINPPLSIIDEEVKLTQEVI
SFLDDARHRKKMGSACLNWVKEEHSSSKILSILKQSYDEIQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41657; Mature: 41526

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHNVGFHMSSQVSKNYKVLHLGDQAFVGYNLVKLLQKNGIKADYLAYKNSQMHYNEDGC
CCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHEEEECCCCEECCCCE
FFFKANSSERFNKIKIIRESLSHFEGYDIIHAHSVFSVPLLLSKNRPYALHLHGSDIRVY
EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHEEEEEEECCCCEEEEEECCCEEEE
ARKNDLLGFGLRKLVNKAKKIFVSTPDLLMDVSSFGKNATFLPNPVDFERFYPKKPEIDL
EECCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCH
QEGFDFIIFHPTRHSLNKGNQIFIKSFSEIISQGYNAKLVMVEWGDLLHESKNLVHKLNI
HCCCCEEEECCCHHCCCCCCEEHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHEEECC
SKNVEWIKSIPPYEMADYYNASDLVFDQFHLKGLGLVSFEAMACGKLTITKYSPEYLKQG
CCCCHHHHCCCCCHHHHCCCCCHHEEEHHHHCCCCEEEEHHEECCEEEEEECCHHHHHCC
YSINPPLSIIDEEVKLTQEVISFLDDARHRKKMGSACLNWVKEEHSSSKILSILKQSYDE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IQG
HCC
>Mature Secondary Structure 
AHNVGFHMSSQVSKNYKVLHLGDQAFVGYNLVKLLQKNGIKADYLAYKNSQMHYNEDGC
CCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHEEEECCCCEECCCCE
FFFKANSSERFNKIKIIRESLSHFEGYDIIHAHSVFSVPLLLSKNRPYALHLHGSDIRVY
EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHEEEEEEECCCCEEEEEECCCEEEE
ARKNDLLGFGLRKLVNKAKKIFVSTPDLLMDVSSFGKNATFLPNPVDFERFYPKKPEIDL
EECCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCH
QEGFDFIIFHPTRHSLNKGNQIFIKSFSEIISQGYNAKLVMVEWGDLLHESKNLVHKLNI
HCCCCEEEECCCHHCCCCCCEEHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHEEECC
SKNVEWIKSIPPYEMADYYNASDLVFDQFHLKGLGLVSFEAMACGKLTITKYSPEYLKQG
CCCCHHHHCCCCCHHHHCCCCCHHEEEHHHHCCCCEEEEHHEECCEEEEEECCHHHHHCC
YSINPPLSIIDEEVKLTQEVISFLDDARHRKKMGSACLNWVKEEHSSSKILSILKQSYDE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IQG
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA