| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is acbA [H]
Identifier: 21227271
GI number: 21227271
Start: 1387902
End: 1388189
Strand: Direct
Name: acbA [H]
Synonym: MM_1169
Alternate gene names: 21227271
Gene position: 1387902-1388189 (Clockwise)
Preceding gene: 21227270
Following gene: 21227272
Centisome position: 33.88
GC content: 45.49
Gene sequence:
>288_bases ATGAAAGAGGTTATACTTGCAGGCGGTACGGGCAGCAGACTGTATCCTCTAACCAAAGTAACTAACAAGCACCTTTTGCC TGTCTATGACAAGCCAATGATCTACTACCCGATGGAGACTCTAATAAACGCCGGAATAAAAGAAATAATGATCGTTTCCG GCAGAGGACATGCAGGACATTTTCTTGAACTTTTGGGTTCCGGGGTAGAGCATGAAGTGCATTTTACTTATGAAATTCAG GAAAAAGCCGGGGGGATTGCCCAGGCACTCAGCCTTGCGGAAGATTGA
Upstream 100 bases:
>100_bases AAGCAAAACGTCCAATGTATTCAGTTCTTGTGAATACTAAAACCGGACCCATGAGACACTGGAGAGAAGCACTTAAGGAC TATTTGCAGGGGAGAAATAT
Downstream 100 bases:
>100_bases GGGTTTCTGGAGTGATGCTGGGACTTTTGAGAGTTTGTTAAGAGCTGGAATGCTTGTAAAGCAAAGTATAGAAAAAAACT TATAGGGCATCATACAATAA
Product: glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: dTDP-glucose pyrophosphorylase; dTDP-glucose synthase [H]
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MKEVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPMETLINAGIKEIMIVSGRGHAGHFLELLGSGVEHEVHFTYEIQ EKAGGIAQALSLAED
Sequences:
>Translated_95_residues MKEVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPMETLINAGIKEIMIVSGRGHAGHFLELLGSGVEHEVHFTYEIQ EKAGGIAQALSLAED >Mature_95_residues MKEVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPMETLINAGIKEIMIVSGRGHAGHFLELLGSGVEHEVHFTYEIQ EKAGGIAQALSLAED
Specific function: Probably involved in the biosynthesis of the acarviose moiety of the alpha-glucosidase inhibitor acarbose [H]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788351, Length=94, Percent_Identity=47.8723404255319, Blast_Score=100, Evalue=2e-23, Organism=Escherichia coli, GI1790224, Length=94, Percent_Identity=48.936170212766, Blast_Score=99, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005907 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.24 [H]
Molecular weight: Translated: 10409; Mature: 10409
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPMETLINAGIKEIMIVSGRGHAGH CCCEEEECCCCCCEEEEECCCCCCCCEECCCCEEEECHHHHHHCCCCCEEEECCCCCCHH FLELLGSGVEHEVHFTYEIQEKAGGIAQALSLAED HHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCC >Mature Secondary Structure MKEVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPMETLINAGIKEIMIVSGRGHAGH CCCEEEECCCCCCEEEEECCCCCCCCEECCCCEEEECHHHHHHCCCCCEEEECCCCCCHH FLELLGSGVEHEVHFTYEIQEKAGGIAQALSLAED HHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10196166 [H]