| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227266
Identifier: 21227266
GI number: 21227266
Start: 1383407
End: 1383766
Strand: Direct
Name: 21227266
Synonym: MM_1164
Alternate gene names: NA
Gene position: 1383407-1383766 (Clockwise)
Preceding gene: 21227265
Following gene: 21227268
Centisome position: 33.77
GC content: 42.5
Gene sequence:
>360_bases ATGACCACAGGAGTTGCGGGGGATTACATAGAAGATATACTTAATGCCCTACTCGATATTCAGGACTTTATAGCCGAATA CTCCTATGAACAGTTTGTCAACGATAGGAAAACACAATATGCAGTGATCCGAGCCATCGAAATCATAGGAGAGGCATCTA AAAACTTACCACTGGAGATAAGGGAAAAATATCGGGCTGTACCATGGAGAGATATGGCTACCATGCGAGACAGGCTAATT CATGGATATTTTGGCGTGGATCTGATAATTTTGTGGGACACCGCACAACAGGATATCCCCCTCTTGTCCCGATTTTCAAA TCTATCCTTAGTGAGATTGAGTAACCTGCCATTCAAGTAA
Upstream 100 bases:
>100_bases ATGAATTATCGGATAAACTTGGGATCAAGGTTGATCTGGTATCAAAAACTGCCCTGAAGCCGAGGATAGGAAAACACATC CTTTTAGAAGTGGTTGAAAT
Downstream 100 bases:
>100_bases TTTAGATACATGCCATGAATGTTATGGAATGTATGTTATGTTAGATATTTTTCAGATACCATTACAGCATAATTCATCCC GCCAGAACCTACTTATTTTA
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTTGVAGDYIEDILNALLDIQDFIAEYSYEQFVNDRKTQYAVIRAIEIIGEASKNLPLEIREKYRAVPWRDMATMRDRLI HGYFGVDLIILWDTAQQDIPLLSRFSNLSLVRLSNLPFK
Sequences:
>Translated_119_residues MTTGVAGDYIEDILNALLDIQDFIAEYSYEQFVNDRKTQYAVIRAIEIIGEASKNLPLEIREKYRAVPWRDMATMRDRLI HGYFGVDLIILWDTAQQDIPLLSRFSNLSLVRLSNLPFK >Mature_118_residues TTGVAGDYIEDILNALLDIQDFIAEYSYEQFVNDRKTQYAVIRAIEIIGEASKNLPLEIREKYRAVPWRDMATMRDRLIH GYFGVDLIILWDTAQQDIPLLSRFSNLSLVRLSNLPFK
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008201 [H]
Pfam domain/function: PF01934 DUF86 [H]
EC number: NA
Molecular weight: Translated: 13812; Mature: 13681
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGVAGDYIEDILNALLDIQDFIAEYSYEQFVNDRKTQYAVIRAIEIIGEASKNLPLEI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH REKYRAVPWRDMATMRDRLIHGYFGVDLIILWDTAQQDIPLLSRFSNLSLVRLSNLPFK HHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure TTGVAGDYIEDILNALLDIQDFIAEYSYEQFVNDRKTQYAVIRAIEIIGEASKNLPLEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH REKYRAVPWRDMATMRDRLIHGYFGVDLIILWDTAQQDIPLLSRFSNLSLVRLSNLPFK HHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]