| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mtaC [H]
Identifier: 21227175
GI number: 21227175
Start: 1262243
End: 1263019
Strand: Direct
Name: mtaC [H]
Synonym: MM_1073
Alternate gene names: 21227175
Gene position: 1262243-1263019 (Clockwise)
Preceding gene: 21227174
Following gene: 21227176
Centisome position: 30.81
GC content: 46.72
Gene sequence:
>777_bases ATGTTGGATTTGAAACTGGAAGATGTCGATGGCATATTAGTACGCTACAACGTCGCCCTCGAAAAGGAAATGACACCTGA CGAAGCAGCAGAAGAGCTTTACCCCAAGGATAAACTCATTTATCCAATTGCAAAAGCTATCTACGAGGGAGAAGAAGACG ATGTTGTAGATGGTCTTCAGGCAGCAATCGATGCAGGAAAGAACCCGATTGCCCTTATTGACGATGCCCTTATGGTAGGA ATGGGAGTTGTAACCCAGCTTTATGATGATGGTATCATTTTCCTCCCCAACGTTATGATGTCTGCTGACGCTATGCTTGC AGGTATCGAATATTGTAAGACCAAGACCACAGAAGTTCCCGAGCCAAAGGGCAAGGTTGTCTGCCATGTCGCAGAAGGTG ACGTCCATGACATCGGAAAGAACATTGTTGTTGCCCTCCTGAGAGCAAACGGCTATGATGTAGTTGACCTCGGAAGAGAT GTTCCTGTAGATGAGGTCATTGAATGTGTTACAAAAGAGAAGCCGATACTGCTTACAGGTACTGCCCTCATGACAACCAC CATGTATGCATTCAAGGAAATCAATGACAAACTCCTTGAGAAGGGAATCAAACTGCCCTTTGCATGCGGTGGCGGTGCTG TGAACCAGGACTTCGTGTCCCAGTATGACCTCGGAGTTTATGGTGAAGAAGCTGCTGATGCCCCCAAGATTGCTGACGCA ATCGTAGCAGGTACCACAGATATCGCAGCATTAAGAGAGGAATTCCACAAGCACTAA
Upstream 100 bases:
>100_bases TTTCGGGATGAAATACCTGAAAATTCAGGAAGATTCAACTTGCAGGATCAAAGATCTGAGCAATCTGAGATCTCTTCATT ATTAAAATGGAGGTTAAAAT
Downstream 100 bases:
>100_bases GGAGGGAGCAAAATGGTAAAGAAATACACTTCAATGGCTTACGCTAACGCAGATGAACTTATTTTCGGGCAATGTAAATT CCCGGTAAAGGCAGGCCTTG
Product: methanol corrinoid protein
Products: L-Methionine; 5,6,7,8-Tetrahydrofolate [C]
Alternate protein names: TCP 2 [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MLDLKLEDVDGILVRYNVALEKEMTPDEAAEELYPKDKLIYPIAKAIYEGEEDDVVDGLQAAIDAGKNPIALIDDALMVG MGVVTQLYDDGIIFLPNVMMSADAMLAGIEYCKTKTTEVPEPKGKVVCHVAEGDVHDIGKNIVVALLRANGYDVVDLGRD VPVDEVIECVTKEKPILLTGTALMTTTMYAFKEINDKLLEKGIKLPFACGGGAVNQDFVSQYDLGVYGEEAADAPKIADA IVAGTTDIAALREEFHKH
Sequences:
>Translated_258_residues MLDLKLEDVDGILVRYNVALEKEMTPDEAAEELYPKDKLIYPIAKAIYEGEEDDVVDGLQAAIDAGKNPIALIDDALMVG MGVVTQLYDDGIIFLPNVMMSADAMLAGIEYCKTKTTEVPEPKGKVVCHVAEGDVHDIGKNIVVALLRANGYDVVDLGRD VPVDEVIECVTKEKPILLTGTALMTTTMYAFKEINDKLLEKGIKLPFACGGGAVNQDFVSQYDLGVYGEEAADAPKIADA IVAGTTDIAALREEFHKH >Mature_258_residues MLDLKLEDVDGILVRYNVALEKEMTPDEAAEELYPKDKLIYPIAKAIYEGEEDDVVDGLQAAIDAGKNPIALIDDALMVG MGVVTQLYDDGIIFLPNVMMSADAMLAGIEYCKTKTTEVPEPKGKVVCHVAEGDVHDIGKNIVVALLRANGYDVVDLGRD VPVDEVIECVTKEKPILLTGTALMTTTMYAFKEINDKLLEKGIKLPFACGGGAVNQDFVSQYDLGVYGEEAADAPKIADA IVAGTTDIAALREEFHKH
Specific function: Acts probably as a methyl group carrier between mttB and either mtbA or mtaA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI169790923, Length=197, Percent_Identity=28.9340101522843, Blast_Score=78, Evalue=9e-15, Organism=Escherichia coli, GI1790450, Length=182, Percent_Identity=32.4175824175824, Blast_Score=97, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17535405, Length=183, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=5e-16,
Paralogues:
None
Copy number: 513 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1320 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR003759 - InterPro: IPR012741 [H]
Pfam domain/function: PF02310 B12-binding; PF02607 B12-binding_2 [H]
EC number: 2.1.1.13 [C]
Molecular weight: Translated: 27920; Mature: 27920
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLKLEDVDGILVRYNVALEKEMTPDEAAEELYPKDKLIYPIAKAIYEGEEDDVVDGLQ CCCCEEECCCCEEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHH AAIDAGKNPIALIDDALMVGMGVVTQLYDDGIIFLPNVMMSADAMLAGIEYCKTKTTEVP HHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCC EPKGKVVCHVAEGDVHDIGKNIVVALLRANGYDVVDLGRDVPVDEVIECVTKEKPILLTG CCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCEEEEC TALMTTTMYAFKEINDKLLEKGIKLPFACGGGAVNQDFVSQYDLGVYGEEAADAPKIADA HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHH IVAGTTDIAALREEFHKH HHCCCHHHHHHHHHHHCC >Mature Secondary Structure MLDLKLEDVDGILVRYNVALEKEMTPDEAAEELYPKDKLIYPIAKAIYEGEEDDVVDGLQ CCCCEEECCCCEEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHH AAIDAGKNPIALIDDALMVGMGVVTQLYDDGIIFLPNVMMSADAMLAGIEYCKTKTTEVP HHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCC EPKGKVVCHVAEGDVHDIGKNIVVALLRANGYDVVDLGRDVPVDEVIECVTKEKPILLTG CCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCEEEEC TALMTTTMYAFKEINDKLLEKGIKLPFACGGGAVNQDFVSQYDLGVYGEEAADAPKIADA HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHH IVAGTTDIAALREEFHKH HHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: ATP; Cobinamide; S-adenosyl-L-methionine [C]
Metal ions: Mg2+ [C]
Kcat value (1/min): 500-780 [C]
Specific activity: 3.8
Km value (mM): 0.035 {S-methyltetrahydrofolate}} 0.0016 {S-adenosyl-L-methionine}} 0.00065 {S-adenosyl-L-methionine}} 0.06 {methyltetrahydrofolate}} 0.03 {methyltetrahydrofolate}} 0.016 {homocysteine}} [C]
Substrates: 5-Methyltetrahydrofolate; L-Homocysteine [C]
Specific reaction: 5-Methyltetrahydrofolate + L-Homocysteine --> L-Methionine + 5,6,7,8-Tetrahydrofolate [C]
General reaction: Methyl group transfer [C]
Inhibitor: 5, 6-Dimethyl benzimidazole; alpha-Ribazole 3'-phosphate; Be2+; Cobinamide; Propyl iodide; Sr2+ [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]