| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227152
Identifier: 21227152
GI number: 21227152
Start: 1229654
End: 1229845
Strand: Direct
Name: 21227152
Synonym: MM_1050
Alternate gene names: NA
Gene position: 1229654-1229845 (Clockwise)
Preceding gene: 21227149
Following gene: 21227154
Centisome position: 30.02
GC content: 40.1
Gene sequence:
>192_bases ATGACAATTTACTTTCCTTTTTCTGCGACTATTCGGAAAGAAGAGAACACCTATATTTCAATCTGCCCGGAGGCGGATAT TGTCTGTAGAGGGGAAAGTATCGAAGAAGCGGTTACAAACCTGAAAAAAGAAGTTGAACAATTCCTGGAGGAAGAACTGC CCAGGGGATTTTCGAGAATTGTATATTACTAA
Upstream 100 bases:
>100_bases TGCGCTTGTAGAGGAGAACAGAAAGAAAAGATCAGCGAAAATAGACATAAGGAATGTCAGACTCGAAACGTTTAAAATAA ACTGAATAATATTTCAAGGT
Downstream 100 bases:
>100_bases GAAATTTTTTTAATAAGAAACGTTTTGTCACCTGGCTCAAAATTCCCCGGATTCTGAAAAATAGCGCTTATAAAATACAG AATCCCATTTTAAGCTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MTIYFPFSATIRKEENTYISICPEADIVCRGESIEEAVTNLKKEVEQFLEEELPRGFSRIVYY
Sequences:
>Translated_63_residues MTIYFPFSATIRKEENTYISICPEADIVCRGESIEEAVTNLKKEVEQFLEEELPRGFSRIVYY >Mature_62_residues TIYFPFSATIRKEENTYISICPEADIVCRGESIEEAVTNLKKEVEQFLEEELPRGFSRIVYY
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7397; Mature: 7266
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYFPFSATIRKEENTYISICPEADIVCRGESIEEAVTNLKKEVEQFLEEELPRGFSRI CEEEECCCCEEECCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH VYY CCC >Mature Secondary Structure TIYFPFSATIRKEENTYISICPEADIVCRGESIEEAVTNLKKEVEQFLEEELPRGFSRI EEEECCCCEEECCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH VYY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA