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The map label for this gene is rplP0 [H]

Identifier: 21227115

GI number: 21227115

Start: 1186397

End: 1187440

Strand: Direct

Name: rplP0 [H]

Synonym: MM_1013

Alternate gene names: 21227115

Gene position: 1186397-1187440 (Clockwise)

Preceding gene: 21227114

Following gene: 21227116

Centisome position: 28.96

GC content: 51.15

Gene sequence:

>1044_bases
ATGGCAGAAGAAAGGCATCACACCGAGCACATCCCGCAGTGGAAAAAGGATGAAATTGAAAATATTAAGGAGCTCATCCA
GTCTCACAAAGTTTTCGGGATGGTTCGGATCGAAGGCATCCTCGCAACCAAGATCCAGAAGATCCGCCGGGACCTTAAGG
ACGTTGCGGTGCTCAAAGTCTCCAGGAACACCCTCACAGAGCGTGCTTTAAACCAGCTTGGGGAATCTATTCCCGAAATG
ACCAGGTATCTGGACAATCAGACCGCTCTGATATTTACCAATGAAAGTCCCTTCAAGCTTTACAAACTGCTTGAGCAGAC
AAAGACTCCTTCTCCGATTAAAGCAGGCGCAATAGCTCCAGAGGACATAATTGTCCAGAAGGGGCCCACCAGTTTTCCGC
CCGGTCCGATTCTGGGTGAACTCCAGAGTGCAGGAATTCCCGCTTCAATCGATGCCGGAAAGGTGGCAGTAAAGGAAACA
AAGGTTGTCTGTAAAGCAGGCGAGGCAGTCCCTCAGAAACTCGCTACCATGCTTTCAAAGCTGGAAATATACCCGCTTAT
CGTCGGGCTTGACCTTAGAGCCGCCTACGATGACGGGACAATTTACGAGCCTGAACTCCTTGCAGTTGATGAAAGCAAGT
ACTTCTCTGACATTATCAGGGCAGCTCAGAACGCTTTCAACCTCTCGGTCAACACAGCATACCCGACAGGCGCAACAATC
GGCACCCTGCTGGCAAAAGCCTATGCAGAATCAAAGAGCCTTGGTGTCAATGCTGTTATCCTTGAACCTGGAGTCATGGA
CTCCTTGCTGGCAAAAGCCCATGTTCAGATGACATCCGTTGCATCCGAAGCCGCAGAAAAGGACGCAAATGCCGTGGACG
ACGACCTGAGAGAAGTTCTTGGGGCAGCCGCAAGCGCAGCCGCAGCAGCCACAGTAGCAGCTCCTGCCGCAGAAGAAGAA
AAGAAGGAAGAAGAACCTGAAGAGGAAGAAGAGGACCATGCCGAAGAAGATGGAATGGCCGGACTCGGTGCCCTTTTCGG
ATAA

Upstream 100 bases:

>100_bases
TATTATGTCCAGGCTTGAGCGTGTCCTCGATAAGGGCAAGCACAACCTGAGATCGGTCTATGTCACGACAACCATGGGAA
AATCAGAGAGGGTGGTGTAA

Downstream 100 bases:

>100_bases
ACAGATTTACATTTACGCTAATACAAAGTTAGGTGATTAACGATGGAATACATATATGCAGCTCTCTTATTGCACAACGC
TGGTAAAGCAATTACCGAAG

Product: acidic ribosomal protein P0

Products: NA

Alternate protein names: L10E [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MAEERHHTEHIPQWKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIPEM
TRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKET
KVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATI
GTLLAKAYAESKSLGVNAVILEPGVMDSLLAKAHVQMTSVASEAAEKDANAVDDDLREVLGAAASAAAAATVAAPAAEEE
KKEEEPEEEEEDHAEEDGMAGLGALFG

Sequences:

>Translated_347_residues
MAEERHHTEHIPQWKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIPEM
TRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKET
KVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATI
GTLLAKAYAESKSLGVNAVILEPGVMDSLLAKAHVQMTSVASEAAEKDANAVDDDLREVLGAAASAAAAATVAAPAAEEE
KKEEEPEEEEEDHAEEDGMAGLGALFG
>Mature_346_residues
AEERHHTEHIPQWKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIPEMT
RYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETK
VVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATIG
TLLAKAYAESKSLGVNAVILEPGVMDSLLAKAHVQMTSVASEAAEKDANAVDDDLREVLGAAASAAAAATVAAPAAEEEK
KEEEPEEEEEDHAEEDGMAGLGALFG

Specific function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10 [H]

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family [H]

Homologues:

Organism=Homo sapiens, GI4506667, Length=246, Percent_Identity=26.4227642276423, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI16933546, Length=246, Percent_Identity=26.4227642276423, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17506815, Length=249, Percent_Identity=26.9076305220884, Blast_Score=94, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6323371, Length=260, Percent_Identity=24.6153846153846, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17737731, Length=238, Percent_Identity=24.3697478991597, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001813
- InterPro:   IPR001790
- InterPro:   IPR013522
- InterPro:   IPR022909 [H]

Pfam domain/function: PF00428 Ribosomal_60s; PF00466 Ribosomal_L10 [H]

EC number: NA

Molecular weight: Translated: 37356; Mature: 37225

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEERHHTEHIPQWKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKV
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRNTLTERALNQLGESIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
EDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSK
HHEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHH
LEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATI
HHHHHEEEECEEEEECCCCCEECCCEEEECCHHHHHHHHHHHHHHHEEEEECCCCCCHHH
GTLLAKAYAESKSLGVNAVILEPGVMDSLLAKAHVQMTSVASEAAEKDANAVDDDLREVL
HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GAAASAAAAATVAAPAAEEEKKEEEPEEEEEDHAEEDGMAGLGALFG
HHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure 
AEERHHTEHIPQWKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKV
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRNTLTERALNQLGESIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
EDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSK
HHEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHH
LEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATI
HHHHHEEEECEEEEECCCCCEECCCEEEECCHHHHHHHHHHHHHHHEEEEECCCCCCHHH
GTLLAKAYAESKSLGVNAVILEPGVMDSLLAKAHVQMTSVASEAAEKDANAVDDDLREVL
HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GAAASAAAAATVAAPAAEEEKKEEEPEEEEEDHAEEDGMAGLGALFG
HHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]