Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227090

Identifier: 21227090

GI number: 21227090

Start: 1165887

End: 1166252

Strand: Reverse

Name: 21227090

Synonym: MM_0988

Alternate gene names: NA

Gene position: 1166252-1165887 (Counterclockwise)

Preceding gene: 21227095

Following gene: 21227089

Centisome position: 28.47

GC content: 49.18

Gene sequence:

>366_bases
ATGAAAATCTGCATAAGTGCGTGTGGAAAGGACCCTGATTCTGAAGTGGACCCTCAATTTGGAAGATGCAACTATTTCCT
GGTGATCGACCCGGATGCAGGATCAATAAGCTCAATTAAAAACCCGGGTTCTGAAGCCTCAGGTGGCGCAGGAATTAAGG
CAGCAGAGGCGGTTGTGGACGCAGGGGCAGATGTTCTCTTAACCGGAAGCTTGGGGCCAAACTCTTTTTCCGTACTTTCT
GAAGCAGGCATTGAAATTTACTCCGGAGTCAGGGGCACGGTCTCCTCTTCTCTGCGAGAGTATCAGTCCGGAAAACTTTC
CCCTCTCAAGAGTCCAAACGCTTCCAGTCATAGCGGTATGAAATAA

Upstream 100 bases:

>100_bases
ACTTCCCCAGTCTGATAGGATTGACATGCATTTACTCACTTTAAATTTACAGAAAAATGCATATTTTGAGAGTCAGCGGA
TTATAACTGGAGTGTAAAAT

Downstream 100 bases:

>100_bases
AGTTTGACTTAAAGCTTAAACAGAATAAATCTTAAAAATATGGAAATTTGTAATAATACTTTATCCAATGTAACTTGATA
AAAAGGTGACCTGAATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; Dinitrogenase Iron-Molybdenum Cofactor Protein; Dinitrogenase Iron-Molybdenum Cofactor Family Protein

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVDAGADVLLTGSLGPNSFSVLS
EAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGMK

Sequences:

>Translated_121_residues
MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVDAGADVLLTGSLGPNSFSVLS
EAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGMK
>Mature_121_residues
MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVDAGADVLLTGSLGPNSFSVLS
EAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGMK

Specific function: Unknown

COG id: COG1433

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12269; Mature: 12269

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVD
CEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AGADVLLTGSLGPNSFSVLSEAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGM
CCCCEEEECCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
K
C
>Mature Secondary Structure
MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVD
CEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AGADVLLTGSLGPNSFSVLSEAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGM
CCCCEEEECCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA