| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227090
Identifier: 21227090
GI number: 21227090
Start: 1165887
End: 1166252
Strand: Reverse
Name: 21227090
Synonym: MM_0988
Alternate gene names: NA
Gene position: 1166252-1165887 (Counterclockwise)
Preceding gene: 21227095
Following gene: 21227089
Centisome position: 28.47
GC content: 49.18
Gene sequence:
>366_bases ATGAAAATCTGCATAAGTGCGTGTGGAAAGGACCCTGATTCTGAAGTGGACCCTCAATTTGGAAGATGCAACTATTTCCT GGTGATCGACCCGGATGCAGGATCAATAAGCTCAATTAAAAACCCGGGTTCTGAAGCCTCAGGTGGCGCAGGAATTAAGG CAGCAGAGGCGGTTGTGGACGCAGGGGCAGATGTTCTCTTAACCGGAAGCTTGGGGCCAAACTCTTTTTCCGTACTTTCT GAAGCAGGCATTGAAATTTACTCCGGAGTCAGGGGCACGGTCTCCTCTTCTCTGCGAGAGTATCAGTCCGGAAAACTTTC CCCTCTCAAGAGTCCAAACGCTTCCAGTCATAGCGGTATGAAATAA
Upstream 100 bases:
>100_bases ACTTCCCCAGTCTGATAGGATTGACATGCATTTACTCACTTTAAATTTACAGAAAAATGCATATTTTGAGAGTCAGCGGA TTATAACTGGAGTGTAAAAT
Downstream 100 bases:
>100_bases AGTTTGACTTAAAGCTTAAACAGAATAAATCTTAAAAATATGGAAATTTGTAATAATACTTTATCCAATGTAACTTGATA AAAAGGTGACCTGAATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; Dinitrogenase Iron-Molybdenum Cofactor Protein; Dinitrogenase Iron-Molybdenum Cofactor Family Protein
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVDAGADVLLTGSLGPNSFSVLS EAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGMK
Sequences:
>Translated_121_residues MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVDAGADVLLTGSLGPNSFSVLS EAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGMK >Mature_121_residues MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVDAGADVLLTGSLGPNSFSVLS EAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGMK
Specific function: Unknown
COG id: COG1433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12269; Mature: 12269
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVD CEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AGADVLLTGSLGPNSFSVLSEAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGM CCCCEEEECCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC K C >Mature Secondary Structure MKICISACGKDPDSEVDPQFGRCNYFLVIDPDAGSISSIKNPGSEASGGAGIKAAEAVVD CEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AGADVLLTGSLGPNSFSVLSEAGIEIYSGVRGTVSSSLREYQSGKLSPLKSPNASSHSGM CCCCEEEECCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA