Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227051

Identifier: 21227051

GI number: 21227051

Start: 1125183

End: 1126439

Strand: Reverse

Name: 21227051

Synonym: MM_0949

Alternate gene names: NA

Gene position: 1126439-1125183 (Counterclockwise)

Preceding gene: 21227052

Following gene: 21227049

Centisome position: 27.5

GC content: 43.2

Gene sequence:

>1257_bases
ATGGAACGAATAAAGACGCCGACTGCCTCCATTATTATATTTTTACTTTTAGTTTCATCCATTATTGCGACACCTGCATC
TGCATCGACTGCCGGTGCTAATCTGAAGATTACAATAGTCGAAACAAATCCTTATCCAGCAAAAATAGGAGAATATCTGG
GCCTCACAGTTCAGGTAGAAAACGTGGGCAGGGATAGGGCAGAAAACGTTGATCTCGAAATAGTTCCTGAATATCCCTTT
TCCCTTGATTCCCAGGAAAATGCCGTGCAGAATATAGGGTCTCTTGCTCCTGGTAAATTTGCATCCAGAGAGTTTCATCT
TTTCGTGGACAAGAACGCTCAGAAAGGGGTCAGGTCAATTGATGTTCGTGCCCGAATTAATAATAACAGCCCATGGAGTG
AGAAATCATTTGATATAAGAATAGGTACCGAAACATTCGACAGTAAAGGCACTGTCGAGCTTGCAGAGATTGTCTCATCC
CCTGAAGTCTTTATGCCCGGGGACCGGGGCACTATTACAGCAACTCTTAAAAATACTGCAACAACCCCGATTGTTACTAT
CAGTGGAAAAGATTACGATACCAATGCGAGGATCCAGTCTGCAGTTTTAAGACCACTTTCTGACGAGGTAATCGTCCTTG
ATGCTCCTTACGGAGAAATGGGCCTTCTTGGTCCGGGTGACAGTATCAAACTGACATTTAACGTTATGGTCTCTGAGGAC
GCTAATGAGGGAACGCACAACCTCGAGCTTGCAATCGAAGGCAACTCTTTTGATTACAATAGCCGGAAGAACATTCCCCT
TGAGGTTGACCCCTCAAATGTAAAGGTCATTCCTTCAAAGCCCCTCACGCTGGTAAATGGCGAAGCTACTGTAGAATTTG
ATGTGGCAAATACTCACCCAAACAGTTTTAACTCTGTTAGCATAAGGCCTGAAGCTGAAGGTGTAAAGTTTTACCCTGTC
GAATATTTTATCGGACCAATGGACCCTGACGAGCTTTTCACAATAAAGTTTGATGCTGTGGCAGACTCATCTCTGGATAA
CAGATGGGAAACTTCTGAACCTATAAACCTCAGTCTCTCCGCAAGTTATAGCAATGGCATTAACAAGCATGAAAATCTGG
TAAGTAATCTTTATATTCAGCAGACTAGGGAAAACCAGGGAAGTAACTCCGGTATGATTCTACTTGCCCTCGTGCTTGTC
GCCCTTGCCACTGCAGGTGTGTTCTTATATCGAAAAAAACAGAGTAAAAATAAATAA

Upstream 100 bases:

>100_bases
ATACTAATAATCTGGATATATAAAAATAGTCAAGATAGATATGAATAATCAGAACTCCCGGATTATTTTATCTGCATTAA
GCTAATCAGGATGAGTTAAA

Downstream 100 bases:

>100_bases
GTAATCCGGAAGCATTCCGGTAACTAGCTGCTGATGCCTGCAGTTAAATTGTCACTTTTTAATCAGGCATCTTCCTCTGG
ATCTCCATCCTTAAAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MERIKTPTASIIIFLLLVSSIIATPASASTAGANLKITIVETNPYPAKIGEYLGLTVQVENVGRDRAENVDLEIVPEYPF
SLDSQENAVQNIGSLAPGKFASREFHLFVDKNAQKGVRSIDVRARINNNSPWSEKSFDIRIGTETFDSKGTVELAEIVSS
PEVFMPGDRGTITATLKNTATTPIVTISGKDYDTNARIQSAVLRPLSDEVIVLDAPYGEMGLLGPGDSIKLTFNVMVSED
ANEGTHNLELAIEGNSFDYNSRKNIPLEVDPSNVKVIPSKPLTLVNGEATVEFDVANTHPNSFNSVSIRPEAEGVKFYPV
EYFIGPMDPDELFTIKFDAVADSSLDNRWETSEPINLSLSASYSNGINKHENLVSNLYIQQTRENQGSNSGMILLALVLV
ALATAGVFLYRKKQSKNK

Sequences:

>Translated_418_residues
MERIKTPTASIIIFLLLVSSIIATPASASTAGANLKITIVETNPYPAKIGEYLGLTVQVENVGRDRAENVDLEIVPEYPF
SLDSQENAVQNIGSLAPGKFASREFHLFVDKNAQKGVRSIDVRARINNNSPWSEKSFDIRIGTETFDSKGTVELAEIVSS
PEVFMPGDRGTITATLKNTATTPIVTISGKDYDTNARIQSAVLRPLSDEVIVLDAPYGEMGLLGPGDSIKLTFNVMVSED
ANEGTHNLELAIEGNSFDYNSRKNIPLEVDPSNVKVIPSKPLTLVNGEATVEFDVANTHPNSFNSVSIRPEAEGVKFYPV
EYFIGPMDPDELFTIKFDAVADSSLDNRWETSEPINLSLSASYSNGINKHENLVSNLYIQQTRENQGSNSGMILLALVLV
ALATAGVFLYRKKQSKNK
>Mature_418_residues
MERIKTPTASIIIFLLLVSSIIATPASASTAGANLKITIVETNPYPAKIGEYLGLTVQVENVGRDRAENVDLEIVPEYPF
SLDSQENAVQNIGSLAPGKFASREFHLFVDKNAQKGVRSIDVRARINNNSPWSEKSFDIRIGTETFDSKGTVELAEIVSS
PEVFMPGDRGTITATLKNTATTPIVTISGKDYDTNARIQSAVLRPLSDEVIVLDAPYGEMGLLGPGDSIKLTFNVMVSED
ANEGTHNLELAIEGNSFDYNSRKNIPLEVDPSNVKVIPSKPLTLVNGEATVEFDVANTHPNSFNSVSIRPEAEGVKFYPV
EYFIGPMDPDELFTIKFDAVADSSLDNRWETSEPINLSLSASYSNGINKHENLVSNLYIQQTRENQGSNSGMILLALVLV
ALATAGVFLYRKKQSKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45592; Mature: 45592

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIKTPTASIIIFLLLVSSIIATPASASTAGANLKITIVETNPYPAKIGEYLGLTVQVE
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHEEEEEEEE
NVGRDRAENVDLEIVPEYPFSLDSQENAVQNIGSLAPGKFASREFHLFVDKNAQKGVRSI
CCCCCHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCHHCCCEEE
DVRARINNNSPWSEKSFDIRIGTETFDSKGTVELAEIVSSPEVFMPGDRGTITATLKNTA
EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEEECCCCCEEEEEECCCC
TTPIVTISGKDYDTNARIQSAVLRPLSDEVIVLDAPYGEMGLLGPGDSIKLTFNVMVSED
CCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEECCCCCEEEEEEEEEECC
ANEGTHNLELAIEGNSFDYNSRKNIPLEVDPSNVKVIPSKPLTLVNGEATVEFDVANTHP
CCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCEEEECCCEEEEEEEECCCC
NSFNSVSIRPEAEGVKFYPVEYFIGPMDPDELFTIKFDAVADSSLDNRWETSEPINLSLS
CCCCEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEE
ASYSNGINKHENLVSNLYIQQTRENQGSNSGMILLALVLVALATAGVFLYRKKQSKNK
ECCCCCCCHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
>Mature Secondary Structure
MERIKTPTASIIIFLLLVSSIIATPASASTAGANLKITIVETNPYPAKIGEYLGLTVQVE
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHEEEEEEEE
NVGRDRAENVDLEIVPEYPFSLDSQENAVQNIGSLAPGKFASREFHLFVDKNAQKGVRSI
CCCCCHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCHHCCCEEE
DVRARINNNSPWSEKSFDIRIGTETFDSKGTVELAEIVSSPEVFMPGDRGTITATLKNTA
EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEEECCCCCEEEEEECCCC
TTPIVTISGKDYDTNARIQSAVLRPLSDEVIVLDAPYGEMGLLGPGDSIKLTFNVMVSED
CCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEECCCCCEEEEEEEEEECC
ANEGTHNLELAIEGNSFDYNSRKNIPLEVDPSNVKVIPSKPLTLVNGEATVEFDVANTHP
CCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCEEEECCCEEEEEEEECCCC
NSFNSVSIRPEAEGVKFYPVEYFIGPMDPDELFTIKFDAVADSSLDNRWETSEPINLSLS
CCCCEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEE
ASYSNGINKHENLVSNLYIQQTRENQGSNSGMILLALVLVALATAGVFLYRKKQSKNK
ECCCCCCCHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA