Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227020

Identifier: 21227020

GI number: 21227020

Start: 1084945

End: 1085442

Strand: Direct

Name: 21227020

Synonym: MM_0918

Alternate gene names: NA

Gene position: 1084945-1085442 (Clockwise)

Preceding gene: 21227019

Following gene: 21227021

Centisome position: 26.49

GC content: 39.96

Gene sequence:

>498_bases
ATGGAACTTGAGGATATTGTGGAAATTTTAAAAAATGATCCCCAAAAAGTCATTCCTAAGCTCCTTGATGACGTTCGGGA
GCAGTATGGAGAAGTCCCCTATATTATGAATTTTATGAAAGATCTCCCTGAGATCTTCATTCCGAAAACCCTTTATGATA
ACTCCATCATGCGGGAGGTAAAAAATCTCGACCAGGATACCGTGGAACTTATCTCCATTGGAGTGGCTTCTGCCCTTCGC
TGTGAACACTGTTTGAAGATGCATGTAAGAATAGCTAAAAGAAGAGGGATTTCAAAAGAAAAAATATTTTCTGCAATAAT
GATAGGGGCATCTCTGTCAAATGCTGCGGTGCTTGCAGAAAGTACAAGAGCTCTTGCTTCGGAATTTCCAGATGAGAATG
GAAAAAATAAAGAAGAAAAAAACGAAGAAAAAGAGCAATGCGACGACCCTGACTGCGAGGTATGCAATATTGCCGGAGCA
CATATAAAGCAAACATGA

Upstream 100 bases:

>100_bases
ACTGGGTTTGTGCCTTTTCACTTATCCTTAAAACTGTAAAACCCGACCCGGAAAATGGGTCTAGCCCGGTTTCCACGTTA
ATCTATGCTGGTGGTTTCAT

Downstream 100 bases:

>100_bases
ATGAAAGCAGGCATGAATGAAATAAACATGTAAACCTGAAATTTAACTTTTTCAAACTGGTGGATTAAAGAACCAGTTTT
CAATACTTGATTTTAAAGAC

Product: 4-carboxymuconolactone decarboxylase

Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2

Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Carboxymuconolactone Decarboxylase; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase-Like Protein; Alkylhydroperoxidase Like Protein; Alkylhydroperoxidase AhpD Core

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREVKNLDQDTVELISIGVASALR
CEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAESTRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGA
HIKQT

Sequences:

>Translated_165_residues
MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREVKNLDQDTVELISIGVASALR
CEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAESTRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGA
HIKQT
>Mature_165_residues
MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREVKNLDQDTVELISIGVASALR
CEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAESTRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGA
HIKQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.1.44

Molecular weight: Translated: 18665; Mature: 18665

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREV
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KNLDQDTVELISIGVASALRCEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
STRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGAHIKQT
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHCCC
>Mature Secondary Structure
MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREV
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KNLDQDTVELISIGVASALRCEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
STRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGAHIKQT
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate

Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA