| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227020
Identifier: 21227020
GI number: 21227020
Start: 1084945
End: 1085442
Strand: Direct
Name: 21227020
Synonym: MM_0918
Alternate gene names: NA
Gene position: 1084945-1085442 (Clockwise)
Preceding gene: 21227019
Following gene: 21227021
Centisome position: 26.49
GC content: 39.96
Gene sequence:
>498_bases ATGGAACTTGAGGATATTGTGGAAATTTTAAAAAATGATCCCCAAAAAGTCATTCCTAAGCTCCTTGATGACGTTCGGGA GCAGTATGGAGAAGTCCCCTATATTATGAATTTTATGAAAGATCTCCCTGAGATCTTCATTCCGAAAACCCTTTATGATA ACTCCATCATGCGGGAGGTAAAAAATCTCGACCAGGATACCGTGGAACTTATCTCCATTGGAGTGGCTTCTGCCCTTCGC TGTGAACACTGTTTGAAGATGCATGTAAGAATAGCTAAAAGAAGAGGGATTTCAAAAGAAAAAATATTTTCTGCAATAAT GATAGGGGCATCTCTGTCAAATGCTGCGGTGCTTGCAGAAAGTACAAGAGCTCTTGCTTCGGAATTTCCAGATGAGAATG GAAAAAATAAAGAAGAAAAAAACGAAGAAAAAGAGCAATGCGACGACCCTGACTGCGAGGTATGCAATATTGCCGGAGCA CATATAAAGCAAACATGA
Upstream 100 bases:
>100_bases ACTGGGTTTGTGCCTTTTCACTTATCCTTAAAACTGTAAAACCCGACCCGGAAAATGGGTCTAGCCCGGTTTCCACGTTA ATCTATGCTGGTGGTTTCAT
Downstream 100 bases:
>100_bases ATGAAAGCAGGCATGAATGAAATAAACATGTAAACCTGAAATTTAACTTTTTCAAACTGGTGGATTAAAGAACCAGTTTT CAATACTTGATTTTAAAGAC
Product: 4-carboxymuconolactone decarboxylase
Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Carboxymuconolactone Decarboxylase; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase-Like Protein; Alkylhydroperoxidase Like Protein; Alkylhydroperoxidase AhpD Core
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREVKNLDQDTVELISIGVASALR CEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAESTRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGA HIKQT
Sequences:
>Translated_165_residues MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREVKNLDQDTVELISIGVASALR CEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAESTRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGA HIKQT >Mature_165_residues MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREVKNLDQDTVELISIGVASALR CEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAESTRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGA HIKQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.44
Molecular weight: Translated: 18665; Mature: 18665
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREV CCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH KNLDQDTVELISIGVASALRCEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH STRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGAHIKQT HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHCCC >Mature Secondary Structure MELEDIVEILKNDPQKVIPKLLDDVREQYGEVPYIMNFMKDLPEIFIPKTLYDNSIMREV CCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH KNLDQDTVELISIGVASALRCEHCLKMHVRIAKRRGISKEKIFSAIMIGASLSNAAVLAE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH STRALASEFPDENGKNKEEKNEEKEQCDDPDCEVCNIAGAHIKQT HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate
Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA