Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227018

Identifier: 21227018

GI number: 21227018

Start: 1083267

End: 1083866

Strand: Direct

Name: 21227018

Synonym: MM_0916

Alternate gene names: NA

Gene position: 1083267-1083866 (Clockwise)

Preceding gene: 21227017

Following gene: 21227019

Centisome position: 26.44

GC content: 46.33

Gene sequence:

>600_bases
ATGGATTCGCTTGAGACCTTTGTTGTCGAGTCCGCAATTGATTCGGAAACGGAGTTTTACAGAAAGATCATCGAGGACAA
CCTTGCGAGTCTCAAGCTTGCCCCTGCAATAGGAAGAATCAAGGTAGTACTGAGACCTGAAGATTCCCTTTTCCAGATGG
CAATCATCCTGAGGGATGTAGGCACCAGGGTTACGACAATCGATATTGCCGACGTGGAAACAAAACCCGTCGCCGGCGAA
GTAGTGATCTCTATTAAAAAAGAACAGTATATCCCGGAACTGCTTGTAAAACTCTGGGAACGCTACGGAAAAGCAAACAT
CAGTCAGCCGGACCGCTGGACAGTGACCATCAGTACGGATAAGCCTGCAGAAGAGGCTGAATTTATTAAAGAAATGCTGA
TTGCAGATCCCAGGCACAGGCTTCATGAAAACCTTGTGGACTTTGCAATCCGGGTAACACCAGAGGGTTTCAGGGTGCGC
TACCACCTTTATAAAGGCAATCGCTTTGTATTTGTAGCATCAGAAGAAACATTAGAGCGTGAGTGGATCGAAGAAGCAGG
AGCAATGCTAGACGAATTAATGGAAGGAGGGAAAAAGTAA

Upstream 100 bases:

>100_bases
CTTCTCAAGATCGATGTCCTTGTTCCTGAAAACTCCCACCTGATAGGGGCAGTAGGAGCAGCACTTCTTGCTTCCGGCTT
CGTGGAGGAGTGAGATCAAA

Downstream 100 bases:

>100_bases
GATGGCTGTACTCCTACCCTATCTTTATACCGGCGGAGTCCATAAGCACGGGCTTCTAATCGAGCTGATGGAAGACCTTG
GAGGATACATAATTCAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDVGTRVTTIDIADVETKPVAGE
VVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTDKPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVR
YHLYKGNRFVFVASEETLEREWIEEAGAMLDELMEGGKK

Sequences:

>Translated_199_residues
MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDVGTRVTTIDIADVETKPVAGE
VVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTDKPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVR
YHLYKGNRFVFVASEETLEREWIEEAGAMLDELMEGGKK
>Mature_199_residues
MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDVGTRVTTIDIADVETKPVAGE
VVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTDKPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVR
YHLYKGNRFVFVASEETLEREWIEEAGAMLDELMEGGKK

Specific function: Unknown

COG id: COG4051

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22839; Mature: 22839

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDV
CCCHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHC
GTRVTTIDIADVETKPVAGEVVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTD
CCEEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
KPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVRYHLYKGNRFVFVASEETLER
CCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCEEEEEEEEECCEEEEEECHHHHHH
EWIEEAGAMLDELMEGGKK
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDV
CCCHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHC
GTRVTTIDIADVETKPVAGEVVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTD
CCEEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
KPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVRYHLYKGNRFVFVASEETLER
CCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCEEEEEEEEECCEEEEEECHHHHHH
EWIEEAGAMLDELMEGGKK
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA