| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227018
Identifier: 21227018
GI number: 21227018
Start: 1083267
End: 1083866
Strand: Direct
Name: 21227018
Synonym: MM_0916
Alternate gene names: NA
Gene position: 1083267-1083866 (Clockwise)
Preceding gene: 21227017
Following gene: 21227019
Centisome position: 26.44
GC content: 46.33
Gene sequence:
>600_bases ATGGATTCGCTTGAGACCTTTGTTGTCGAGTCCGCAATTGATTCGGAAACGGAGTTTTACAGAAAGATCATCGAGGACAA CCTTGCGAGTCTCAAGCTTGCCCCTGCAATAGGAAGAATCAAGGTAGTACTGAGACCTGAAGATTCCCTTTTCCAGATGG CAATCATCCTGAGGGATGTAGGCACCAGGGTTACGACAATCGATATTGCCGACGTGGAAACAAAACCCGTCGCCGGCGAA GTAGTGATCTCTATTAAAAAAGAACAGTATATCCCGGAACTGCTTGTAAAACTCTGGGAACGCTACGGAAAAGCAAACAT CAGTCAGCCGGACCGCTGGACAGTGACCATCAGTACGGATAAGCCTGCAGAAGAGGCTGAATTTATTAAAGAAATGCTGA TTGCAGATCCCAGGCACAGGCTTCATGAAAACCTTGTGGACTTTGCAATCCGGGTAACACCAGAGGGTTTCAGGGTGCGC TACCACCTTTATAAAGGCAATCGCTTTGTATTTGTAGCATCAGAAGAAACATTAGAGCGTGAGTGGATCGAAGAAGCAGG AGCAATGCTAGACGAATTAATGGAAGGAGGGAAAAAGTAA
Upstream 100 bases:
>100_bases CTTCTCAAGATCGATGTCCTTGTTCCTGAAAACTCCCACCTGATAGGGGCAGTAGGAGCAGCACTTCTTGCTTCCGGCTT CGTGGAGGAGTGAGATCAAA
Downstream 100 bases:
>100_bases GATGGCTGTACTCCTACCCTATCTTTATACCGGCGGAGTCCATAAGCACGGGCTTCTAATCGAGCTGATGGAAGACCTTG GAGGATACATAATTCAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDVGTRVTTIDIADVETKPVAGE VVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTDKPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVR YHLYKGNRFVFVASEETLEREWIEEAGAMLDELMEGGKK
Sequences:
>Translated_199_residues MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDVGTRVTTIDIADVETKPVAGE VVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTDKPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVR YHLYKGNRFVFVASEETLEREWIEEAGAMLDELMEGGKK >Mature_199_residues MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDVGTRVTTIDIADVETKPVAGE VVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTDKPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVR YHLYKGNRFVFVASEETLEREWIEEAGAMLDELMEGGKK
Specific function: Unknown
COG id: COG4051
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22839; Mature: 22839
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDV CCCHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHC GTRVTTIDIADVETKPVAGEVVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTD CCEEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC KPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVRYHLYKGNRFVFVASEETLER CCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCEEEEEEEEECCEEEEEECHHHHHH EWIEEAGAMLDELMEGGKK HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDSLETFVVESAIDSETEFYRKIIEDNLASLKLAPAIGRIKVVLRPEDSLFQMAIILRDV CCCHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHC GTRVTTIDIADVETKPVAGEVVISIKKEQYIPELLVKLWERYGKANISQPDRWTVTISTD CCEEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC KPAEEAEFIKEMLIADPRHRLHENLVDFAIRVTPEGFRVRYHLYKGNRFVFVASEETLER CCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCEEEEEEEEECCEEEEEECHHHHHH EWIEEAGAMLDELMEGGKK HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA