Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226980

Identifier: 21226980

GI number: 21226980

Start: 1036843

End: 1036992

Strand: Direct

Name: 21226980

Synonym: MM_0878

Alternate gene names: NA

Gene position: 1036843-1036992 (Clockwise)

Preceding gene: 21226979

Following gene: 21226981

Centisome position: 25.31

GC content: 32.0

Gene sequence:

>150_bases
TTGAAGTGGGCTTTTATGCTAATGAGAGGGATTACAGAAGTAAAACTGGAAATTGATTCAAAAGTAGTAACTCAAATTGC
CAACATGAATGAAGTTAAAGCCAAGATAATAAGGTTGATGGGGAAAAATTGTGAAAAATACTACTTTTGA

Upstream 100 bases:

>100_bases
CTAATGGTTTACCCGGTAGCGGAATGGAAATTAAGAGAAAGGCTAAATGAAACAGGGGAAACAATGCTTGACCAAGTTAA
AACAAACTCAAAAGCCCACT

Downstream 100 bases:

>100_bases
GTGGAGATCTGCGGAAAGGCAGTTGAATATCGGCTGATTTTTTAATCAGCCTTTTTTATTTGGTGATAACATGGAAAGAA
AACAGATATTAAGGATTTTA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MKWAFMLMRGITEVKLEIDSKVVTQIANMNEVKAKIIRLMGKNCEKYYF

Sequences:

>Translated_49_residues
MKWAFMLMRGITEVKLEIDSKVVTQIANMNEVKAKIIRLMGKNCEKYYF
>Mature_49_residues
MKWAFMLMRGITEVKLEIDSKVVTQIANMNEVKAKIIRLMGKNCEKYYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5814; Mature: 5814

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
10.2 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
10.2 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWAFMLMRGITEVKLEIDSKVVTQIANMNEVKAKIIRLMGKNCEKYYF
CCHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKWAFMLMRGITEVKLEIDSKVVTQIANMNEVKAKIIRLMGKNCEKYYF
CCHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA