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The map label for this gene is 21226964

Identifier: 21226964

GI number: 21226964

Start: 1017631

End: 1018827

Strand: Direct

Name: 21226964

Synonym: MM_0862

Alternate gene names: NA

Gene position: 1017631-1018827 (Clockwise)

Preceding gene: 21226963

Following gene: 21226965

Centisome position: 24.84

GC content: 45.28

Gene sequence:

>1197_bases
ATGACCTCACTATGTATGTACTTTCAGGTCCATCAACCGTTCAGGCTGCGCAGGTTCTGGCCCGATGACAGACCTGGCTT
TTTCCGCTACTTTGACGAAAGGAGCAACAGGGAGATTTTTGAAAGAGTAGCCCGGAAATGTTATATCCCTGCAAACAGAA
CTCTTCTGGAGTCCATTGATGAGCATAAAGGGGAATTCAAGTTTTCCCTATCAATTACCGGAACCCTGCTTGAACAGTGT
GAACTCTGGGGGGGAGAAGTGCTGGAAAGTGTCAGGCAGCTTGCGGAAACGGGGGCTGTGGAGATTCTGGAAGAAACGTT
TTACCATTCCCTCTCAAGCCTTTTTGAAGACAAAACAGAATTTATCGAAGAAGTAAAAGAACACAGGGAAATGGTTTCCG
ATCTCCTCGGAGTTAAACCTCAGATATTTAGAAACACAGAACTTCTCTACAATAACAGCATAGCAAAAATCGTTTCCGAT
CTGGGTTATAAGGCAATTCTTACGGAAGGAGCGGACCATATGCTTGAGGGAAGGTCTCCTAACGTGCTTTATAAAGCAAA
AGATTCAGGGTTACCCATTCTTTTCAGAAACTACAAACTGAGCGACGATATAGGATACCGTTTCTCTGCACGGTGGTGGG
AAGGATACCCTCTGACCGCGGAAAAATGGGCTTCATGGGCTTCAGGAGTTAAGGAAGATTGCATCAATATCTTTATGGAC
TACGAGACCTTTGGAGAACACCAGTGGAGAGAGACAGGAATTTTTGATTTTGTGGAAAAGCTGCCTGCAGAAGTCCTTAA
AAACGGCCTTGAATTCAGTACTCCTGTAGAGCTTACTGAAAAATACTTACCTGTAGCCGAAATCGATGTTGGAGACTTTT
CAACGATTTCCTGGGCGGATATGGAACGCGACACCAGCGCATGGTTAGGGAACGACATGCAGCGGCGCTGCTTTGAAGAA
ATAAGGCTGCTCGAACCTTTTGTGAAAAAGACAGAAGACCCCGAAATCCTGCGTATATGGAAGCACCTGCTGACTTCGGA
CCACTATTACTACATGTGCACTAAATGGCTCGGAGACGGGGACGTACATTCTTATTTTAGTGTCCATTCCACACCTTTCG
AGGCAGCAGTCAATTTCATGGCTGTACTCATGGACTTTAAGGCTCAGGTATTCAAAAAACTCAGCAGAATGCCTTAA

Upstream 100 bases:

>100_bases
TTTCAATGGGACCCGGAAACTCACGGGAAGGCCATGAAAGGGCTGTGAACTATTATTCCATTCTTTCGGACCTGAGAAGG
GCTGTTCTGGAGGAAAGCGC

Downstream 100 bases:

>100_bases
GGAAATATACATTTACAAAATATTCATACATATCAATGGGAGTTTGTCATATGGTCAGGGACTTATGCATGTTTGCAGGA
TTCAATGAAGATTCGCGAAT

Product: Alpha-amylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTSLCMYFQVHQPFRLRRFWPDDRPGFFRYFDERSNREIFERVARKCYIPANRTLLESIDEHKGEFKFSLSITGTLLEQC
ELWGGEVLESVRQLAETGAVEILEETFYHSLSSLFEDKTEFIEEVKEHREMVSDLLGVKPQIFRNTELLYNNSIAKIVSD
LGYKAILTEGADHMLEGRSPNVLYKAKDSGLPILFRNYKLSDDIGYRFSARWWEGYPLTAEKWASWASGVKEDCINIFMD
YETFGEHQWRETGIFDFVEKLPAEVLKNGLEFSTPVELTEKYLPVAEIDVGDFSTISWADMERDTSAWLGNDMQRRCFEE
IRLLEPFVKKTEDPEILRIWKHLLTSDHYYYMCTKWLGDGDVHSYFSVHSTPFEAAVNFMAVLMDFKAQVFKKLSRMP

Sequences:

>Translated_398_residues
MTSLCMYFQVHQPFRLRRFWPDDRPGFFRYFDERSNREIFERVARKCYIPANRTLLESIDEHKGEFKFSLSITGTLLEQC
ELWGGEVLESVRQLAETGAVEILEETFYHSLSSLFEDKTEFIEEVKEHREMVSDLLGVKPQIFRNTELLYNNSIAKIVSD
LGYKAILTEGADHMLEGRSPNVLYKAKDSGLPILFRNYKLSDDIGYRFSARWWEGYPLTAEKWASWASGVKEDCINIFMD
YETFGEHQWRETGIFDFVEKLPAEVLKNGLEFSTPVELTEKYLPVAEIDVGDFSTISWADMERDTSAWLGNDMQRRCFEE
IRLLEPFVKKTEDPEILRIWKHLLTSDHYYYMCTKWLGDGDVHSYFSVHSTPFEAAVNFMAVLMDFKAQVFKKLSRMP
>Mature_397_residues
TSLCMYFQVHQPFRLRRFWPDDRPGFFRYFDERSNREIFERVARKCYIPANRTLLESIDEHKGEFKFSLSITGTLLEQCE
LWGGEVLESVRQLAETGAVEILEETFYHSLSSLFEDKTEFIEEVKEHREMVSDLLGVKPQIFRNTELLYNNSIAKIVSDL
GYKAILTEGADHMLEGRSPNVLYKAKDSGLPILFRNYKLSDDIGYRFSARWWEGYPLTAEKWASWASGVKEDCINIFMDY
ETFGEHQWRETGIFDFVEKLPAEVLKNGLEFSTPVELTEKYLPVAEIDVGDFSTISWADMERDTSAWLGNDMQRRCFEEI
RLLEPFVKKTEDPEILRIWKHLLTSDHYYYMCTKWLGDGDVHSYFSVHSTPFEAAVNFMAVLMDFKAQVFKKLSRMP

Specific function: Unknown

COG id: COG1449

COG function: function code G; Alpha-amylase/alpha-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 57 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR004300 [H]

Pfam domain/function: PF03065 Glyco_hydro_57 [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 46701; Mature: 46569

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLCMYFQVHQPFRLRRFWPDDRPGFFRYFDERSNREIFERVARKCYIPANRTLLESID
CCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHH
EHKGEFKFSLSITGTLLEQCELWGGEVLESVRQLAETGAVEILEETFYHSLSSLFEDKTE
HCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEEVKEHREMVSDLLGVKPQIFRNTELLYNNSIAKIVSDLGYKAILTEGADHMLEGRSP
HHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCHHHHHHHCCCHHHHHCCHHHHHCCCCC
NVLYKAKDSGLPILFRNYKLSDDIGYRFSARWWEGYPLTAEKWASWASGVKEDCINIFMD
CEEEEECCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
YETFGEHQWRETGIFDFVEKLPAEVLKNGLEFSTPVELTEKYLPVAEIDVGDFSTISWAD
HHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCCCCCHHH
MERDTSAWLGNDMQRRCFEEIRLLEPFVKKTEDPEILRIWKHLLTSDHYYYMCTKWLGDG
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC
DVHSYFSVHSTPFEAAVNFMAVLMDFKAQVFKKLSRMP
CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSLCMYFQVHQPFRLRRFWPDDRPGFFRYFDERSNREIFERVARKCYIPANRTLLESID
CCEEEEEECCCCHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHH
EHKGEFKFSLSITGTLLEQCELWGGEVLESVRQLAETGAVEILEETFYHSLSSLFEDKTE
HCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEEVKEHREMVSDLLGVKPQIFRNTELLYNNSIAKIVSDLGYKAILTEGADHMLEGRSP
HHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCHHHHHHHCCCHHHHHCCHHHHHCCCCC
NVLYKAKDSGLPILFRNYKLSDDIGYRFSARWWEGYPLTAEKWASWASGVKEDCINIFMD
CEEEEECCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
YETFGEHQWRETGIFDFVEKLPAEVLKNGLEFSTPVELTEKYLPVAEIDVGDFSTISWAD
HHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCCCCCHHH
MERDTSAWLGNDMQRRCFEEIRLLEPFVKKTEDPEILRIWKHLLTSDHYYYMCTKWLGDG
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC
DVHSYFSVHSTPFEAAVNFMAVLMDFKAQVFKKLSRMP
CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]