| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is purL [H]
Identifier: 21226962
GI number: 21226962
Start: 1014013
End: 1016007
Strand: Direct
Name: purL [H]
Synonym: MM_0860
Alternate gene names: 21226962
Gene position: 1014013-1016007 (Clockwise)
Preceding gene: 21226961
Following gene: 21226963
Centisome position: 24.75
GC content: 49.67
Gene sequence:
>1995_bases GTGATTATCGGTCCCGGAGACGATGCTGCAATCATCAAATTCGAAGACGGATATGTGCTTGCTATAGGAATGGAAAGCCA CAACCACCCTTCATATGTGGACCCGTATAACGGGGCAGCTACCGGTGTGGGAGGCATTGTAAGAGACATAATTTCCATGG GAGCCCGCCCAATAGCCCTTATGGACCCGCTCTACTTCGGGCCTCTGGACACCCCTAAAAACCTTTTCCTTTTCGAGCAG ATAATAAAAGGAATCGCAGGATACGGGAACTGCATAGGAGTGCCCGTGGTTAATGGTGAGACCTTTTTTGACAGGAGATA CAGCGGAAACCCGCTGGTAAACGTTGTTGCAGTCGGGCTCTGCAAAGAAGAAAAAGTTATGACTTCCCGCTCCCAGAAAG CAGGAAACAAGCTCATTCTTGCAGGTTCAAGCACGGGAAAAGACGGGCTGGGTGGAGCTTCCTTTGCTTCCAGAGACCTC TCGGAATCAGCCGAAGCCGAAGATCGCCCAAGCGTCCAGGTAGGAGACCCCTATACAGAAAAGCTTGTTATGGAAATGAC CCTGGAAGCCATAGATAAAGGGTACATAAAGTCCTGCAAAGACCTCGGAGCTGCAGGGCTTGGGGGAGCGAGTTCGGAAC TGGCTGCTAAAGGAGGACTGGGAGCCTATATTATTGCAGACGCAGTCCCGCAGCGCGAACCCGAAATGAATGCTTATGAG ATCCTGCTTGCCGAATCTCAGGAACGTATGGTCTTTGAGGTAGCCCCTGAAGATGTGGATGCAGTCCTTGCCCTTGTGCA GAAATATGATCTGAACGGGGCTGTGATCGGGCACCTCACAGAAAAGCCCAATTACACTGTTGAGTTCAGAGGCGAAATCG TGGCTGACATCCCTATAGGTTTCCTTACGGGAGGAGCCCCGACCTGTGAAAAGCCTTCAGAGGCTCCCATACACAGGGAA GAAGGCAAAAAGCCGGAAACCCCTGAGGACCTGAAAGCAGCTTTCATGAAAGTCCTGTCTTCACACAACATTGCCTCAAA GGAATGGATCTACAGGCAGTATGACCATGAAGTCCAGCTAAGGACAGTTGTCAAACCAGGAGAAGATTCCGGAGTGCTCA GAATTACAGATAAAAAAGGAATTGCACTTTCCTGCGGCTGCCAGCCCAGAGCAACTCTTCTTGACCCCTATACAGGAGGA AGAACTGCAATCATTGAAAACGCCATGAACCTTGCAGTAAAAGGTGCTGAAGGGCTTGCCATTGTGAACTGCCTCAACTT TGGAAACCCTGAAAACCCCGAAACCTACTGGCAGTTCAAAAACGCCGTACTCGGGCTCGGAGACGCAGCAAGGGAGCTTT CAATCCCGGTTGTAGGAGGAAATGTTTCCCTTTATAATGAAAGCGATGAGTTCAGGACTGCAATCCCCCCAACCCCTTCA ATAGGAATGATCGGAAAAGTTGACCTCGAAACGCCTCTCCCATCGGGCTTCTTTGCAAAAACCGGAGACAGCATTATACT TGTAGGAGAAACAGTTCCTGAAATGGGAGGTTCGGAGTACTATTCCTGCATGGGAGCTGGCAATGCCGGAAAAGTACCTG AGGTACCAAAAAACGCCCCTGAAATAATAAAAGCCGTAATTGAAGCTGTTAAGAGCGGAAAACTGAATTCTGCACACGAC ATTTCCCTCGGAGGAATCGGTGCAGGGCTTGCAAGGATGTGCAAAAACATGGGCGGAAAAGTAGACGTTAGCGAGATTGC TGGCGGGATGAAGGAAGACGAGTTCCTGTTCTCAGAAGCCCCCGCAAGGGCGCTGCTTGCAACAGCTGAACCGGAAGCCG TCCAGGAACTCCTTAAAGGTGTGCCCCATGCCGTAATAGGCACGGTTGGTGGAGATGCCCTTGAGATAAAAGGTAAAGAT TTCGAGCTCTTCATCTCTTTAGAAGAAATCAAAAATGCACATGAAAGCCTTACTAAATTTATGATGATGGGATGA
Upstream 100 bases:
>100_bases CCCTTGTAGAACAGGGCTGTTTTTAAATCTGTGGAGTGAGCACTGCTCCTATCGATCAAGTGCCCCTCTCCTGAAAACCT TTACAACCACGGGCGAAAAC
Downstream 100 bases:
>100_bases TTAACCTCATCCCATTTCTTTTTTCTTTTCAGTTAAGTGTTCTTATCAGCCTGAAGGGCATCTTTTAATTCAATATATTT TTTATTTTGTCATATCTTTT
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 664; Mature: 664
Protein sequence:
>664_residues MIIGPGDDAAIIKFEDGYVLAIGMESHNHPSYVDPYNGAATGVGGIVRDIISMGARPIALMDPLYFGPLDTPKNLFLFEQ IIKGIAGYGNCIGVPVVNGETFFDRRYSGNPLVNVVAVGLCKEEKVMTSRSQKAGNKLILAGSSTGKDGLGGASFASRDL SESAEAEDRPSVQVGDPYTEKLVMEMTLEAIDKGYIKSCKDLGAAGLGGASSELAAKGGLGAYIIADAVPQREPEMNAYE ILLAESQERMVFEVAPEDVDAVLALVQKYDLNGAVIGHLTEKPNYTVEFRGEIVADIPIGFLTGGAPTCEKPSEAPIHRE EGKKPETPEDLKAAFMKVLSSHNIASKEWIYRQYDHEVQLRTVVKPGEDSGVLRITDKKGIALSCGCQPRATLLDPYTGG RTAIIENAMNLAVKGAEGLAIVNCLNFGNPENPETYWQFKNAVLGLGDAARELSIPVVGGNVSLYNESDEFRTAIPPTPS IGMIGKVDLETPLPSGFFAKTGDSIILVGETVPEMGGSEYYSCMGAGNAGKVPEVPKNAPEIIKAVIEAVKSGKLNSAHD ISLGGIGAGLARMCKNMGGKVDVSEIAGGMKEDEFLFSEAPARALLATAEPEAVQELLKGVPHAVIGTVGGDALEIKGKD FELFISLEEIKNAHESLTKFMMMG
Sequences:
>Translated_664_residues MIIGPGDDAAIIKFEDGYVLAIGMESHNHPSYVDPYNGAATGVGGIVRDIISMGARPIALMDPLYFGPLDTPKNLFLFEQ IIKGIAGYGNCIGVPVVNGETFFDRRYSGNPLVNVVAVGLCKEEKVMTSRSQKAGNKLILAGSSTGKDGLGGASFASRDL SESAEAEDRPSVQVGDPYTEKLVMEMTLEAIDKGYIKSCKDLGAAGLGGASSELAAKGGLGAYIIADAVPQREPEMNAYE ILLAESQERMVFEVAPEDVDAVLALVQKYDLNGAVIGHLTEKPNYTVEFRGEIVADIPIGFLTGGAPTCEKPSEAPIHRE EGKKPETPEDLKAAFMKVLSSHNIASKEWIYRQYDHEVQLRTVVKPGEDSGVLRITDKKGIALSCGCQPRATLLDPYTGG RTAIIENAMNLAVKGAEGLAIVNCLNFGNPENPETYWQFKNAVLGLGDAARELSIPVVGGNVSLYNESDEFRTAIPPTPS IGMIGKVDLETPLPSGFFAKTGDSIILVGETVPEMGGSEYYSCMGAGNAGKVPEVPKNAPEIIKAVIEAVKSGKLNSAHD ISLGGIGAGLARMCKNMGGKVDVSEIAGGMKEDEFLFSEAPARALLATAEPEAVQELLKGVPHAVIGTVGGDALEIKGKD FELFISLEEIKNAHESLTKFMMMG >Mature_664_residues MIIGPGDDAAIIKFEDGYVLAIGMESHNHPSYVDPYNGAATGVGGIVRDIISMGARPIALMDPLYFGPLDTPKNLFLFEQ IIKGIAGYGNCIGVPVVNGETFFDRRYSGNPLVNVVAVGLCKEEKVMTSRSQKAGNKLILAGSSTGKDGLGGASFASRDL SESAEAEDRPSVQVGDPYTEKLVMEMTLEAIDKGYIKSCKDLGAAGLGGASSELAAKGGLGAYIIADAVPQREPEMNAYE ILLAESQERMVFEVAPEDVDAVLALVQKYDLNGAVIGHLTEKPNYTVEFRGEIVADIPIGFLTGGAPTCEKPSEAPIHRE EGKKPETPEDLKAAFMKVLSSHNIASKEWIYRQYDHEVQLRTVVKPGEDSGVLRITDKKGIALSCGCQPRATLLDPYTGG RTAIIENAMNLAVKGAEGLAIVNCLNFGNPENPETYWQFKNAVLGLGDAARELSIPVVGGNVSLYNESDEFRTAIPPTPS IGMIGKVDLETPLPSGFFAKTGDSIILVGETVPEMGGSEYYSCMGAGNAGKVPEVPKNAPEIIKAVIEAVKSGKLNSAHD ISLGGIGAGLARMCKNMGGKVDVSEIAGGMKEDEFLFSEAPARALLATAEPEAVQELLKGVPHAVIGTVGGDALEIKGKD FELFISLEEIKNAHESLTKFMMMG
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=693, Percent_Identity=24.0981240981241, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI48994899, Length=332, Percent_Identity=28.6144578313253, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17553022, Length=476, Percent_Identity=26.4705882352941, Blast_Score=86, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6321498, Length=625, Percent_Identity=25.12, Blast_Score=100, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 70407; Mature: 70407
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGPGDDAAIIKFEDGYVLAIGMESHNHPSYVDPYNGAATGVGGIVRDIISMGARPIAL CEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE MDPLYFGPLDTPKNLFLFEQIIKGIAGYGNCIGVPVVNGETFFDRRYSGNPLVNVVAVGL ECCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCCCCCEEEEEEEEC CKEEKVMTSRSQKAGNKLILAGSSTGKDGLGGASFASRDLSESAEAEDRPSVQVGDPYTE CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCHHH KLVMEMTLEAIDKGYIKSCKDLGAAGLGGASSELAAKGGLGAYIIADAVPQREPEMNAYE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEE ILLAESQERMVFEVAPEDVDAVLALVQKYDLNGAVIGHLTEKPNYTVEFRGEIVADIPIG EEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCEEEECCEE FLTGGAPTCEKPSEAPIHREEGKKPETPEDLKAAFMKVLSSHNIASKEWIYRQYDHEVQL EECCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE RTVVKPGEDSGVLRITDKKGIALSCGCQPRATLLDPYTGGRTAIIENAMNLAVKGAEGLA EEEECCCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHHHEEECCCCEE IVNCLNFGNPENPETYWQFKNAVLGLGDAARELSIPVVGGNVSLYNESDEFRTAIPPTPS EEEEECCCCCCCCHHHHHHHHHHEECCCCHHHEEEEEECCCEEEECCCCCCEECCCCCCC IGMIGKVDLETPLPSGFFAKTGDSIILVGETVPEMGGSEYYSCMGAGNAGKVPEVPKNAP CCCEEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCH EIIKAVIEAVKSGKLNSAHDISLGGIGAGLARMCKNMGGKVDVSEIAGGMKEDEFLFSEA HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHCC PARALLATAEPEAVQELLKGVPHAVIGTVGGDALEIKGKDFELFISLEEIKNAHESLTKF CCHHEEECCCHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHH MMMG HHCC >Mature Secondary Structure MIIGPGDDAAIIKFEDGYVLAIGMESHNHPSYVDPYNGAATGVGGIVRDIISMGARPIAL CEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE MDPLYFGPLDTPKNLFLFEQIIKGIAGYGNCIGVPVVNGETFFDRRYSGNPLVNVVAVGL ECCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCCCCCEEEEEEEEC CKEEKVMTSRSQKAGNKLILAGSSTGKDGLGGASFASRDLSESAEAEDRPSVQVGDPYTE CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCHHH KLVMEMTLEAIDKGYIKSCKDLGAAGLGGASSELAAKGGLGAYIIADAVPQREPEMNAYE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEE ILLAESQERMVFEVAPEDVDAVLALVQKYDLNGAVIGHLTEKPNYTVEFRGEIVADIPIG EEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCEEEECCEE FLTGGAPTCEKPSEAPIHREEGKKPETPEDLKAAFMKVLSSHNIASKEWIYRQYDHEVQL EECCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE RTVVKPGEDSGVLRITDKKGIALSCGCQPRATLLDPYTGGRTAIIENAMNLAVKGAEGLA EEEECCCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHHHEEECCCCEE IVNCLNFGNPENPETYWQFKNAVLGLGDAARELSIPVVGGNVSLYNESDEFRTAIPPTPS EEEEECCCCCCCCHHHHHHHHHHEECCCCHHHEEEEEECCCEEEECCCCCCEECCCCCCC IGMIGKVDLETPLPSGFFAKTGDSIILVGETVPEMGGSEYYSCMGAGNAGKVPEVPKNAP CCCEEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCH EIIKAVIEAVKSGKLNSAHDISLGGIGAGLARMCKNMGGKVDVSEIAGGMKEDEFLFSEA HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHCC PARALLATAEPEAVQELLKGVPHAVIGTVGGDALEIKGKDFELFISLEEIKNAHESLTKF CCHHEEECCCHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHH MMMG HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]