| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is bcp [H]
Identifier: 21226951
GI number: 21226951
Start: 1003540
End: 1004022
Strand: Direct
Name: bcp [H]
Synonym: MM_0849
Alternate gene names: 21226951
Gene position: 1003540-1004022 (Clockwise)
Preceding gene: 21226950
Following gene: 21226957
Centisome position: 24.5
GC content: 41.41
Gene sequence:
>483_bases ATGCCAAAAACATCACTTGAATCAGGGCAGGTTTCACCAGACTTTTGCCTTCCGAACCAGGAAGGAAATCAGATATGCCT TGAAAACTTTAAAGGACAATGGGCAGTCCTGTTCTTTTATCCCAGGGACAATACTCCGGGCTGCAGCCTGGAAGCCAGAA GTTTCAGCGACCTGAAAAAAGATTTCGAAGCCGAAAATGCGATAATTCTGGGAGTCAGCAGGGATGGCAAAGAATCCCAT AGAAAGTTCATAGAGAAAAAAGAGCTTAAAATAACACTGCTTTCCGACGAAAAAGCGGAAATCCATGAAAAATATGATGT CATGCACCCTAAAAATTTCAGAGGTAACGAGGTTATAAGCACTGTCCGAACAACTTTCCTTATCAATCCGGAAGGAAAAA TTGAAAAAGTGTGGAATAACGTTAAAGCTGCAGGACATGCCGAAAAAGTGCTTTCTGAATTGAAAACCCTGAAAGGAAAG TAA
Upstream 100 bases:
>100_bases TAGGAAATATAATTTGTATGATAGGATTAAGTGATATAACTTTTAATTATTCACTTAAAAGAAATAATATTGCGGTACGG ACTTACCAGGAGTAAAAAAT
Downstream 100 bases:
>100_bases GCGAAAATAAATTATGACAGAAATATCAGAAGAGGTGCATCAGGAGAGATACACATAGAATGATTTTTGAATGTGTTCAA AACCTGATATTCCTGGCAAT
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPKTSLESGQVSPDFCLPNQEGNQICLENFKGQWAVLFFYPRDNTPGCSLEARSFSDLKKDFEAENAIILGVSRDGKESH RKFIEKKELKITLLSDEKAEIHEKYDVMHPKNFRGNEVISTVRTTFLINPEGKIEKVWNNVKAAGHAEKVLSELKTLKGK
Sequences:
>Translated_160_residues MPKTSLESGQVSPDFCLPNQEGNQICLENFKGQWAVLFFYPRDNTPGCSLEARSFSDLKKDFEAENAIILGVSRDGKESH RKFIEKKELKITLLSDEKAEIHEKYDVMHPKNFRGNEVISTVRTTFLINPEGKIEKVWNNVKAAGHAEKVLSELKTLKGK >Mature_159_residues PKTSLESGQVSPDFCLPNQEGNQICLENFKGQWAVLFFYPRDNTPGCSLEARSFSDLKKDFEAENAIILGVSRDGKESHR KFIEKKELKITLLSDEKAEIHEKYDVMHPKNFRGNEVISTVRTTFLINPEGKIEKVWNNVKAAGHAEKVLSELKTLKGK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=150, Percent_Identity=38, Blast_Score=117, Evalue=3e-28, Organism=Caenorhabditis elegans, GI32565831, Length=149, Percent_Identity=29.5302013422819, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI193204376, Length=149, Percent_Identity=29.5302013422819, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319407, Length=157, Percent_Identity=26.7515923566879, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI17738015, Length=168, Percent_Identity=32.7380952380952, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 18168; Mature: 18037
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTSLESGQVSPDFCLPNQEGNQICLENFKGQWAVLFFYPRDNTPGCSLEARSFSDLKK CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEECCCHHHHHH DFEAENAIILGVSRDGKESHRKFIEKKELKITLLSDEKAEIHEKYDVMHPKNFRGNEVIS HHCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHH TVRTTFLINPEGKIEKVWNNVKAAGHAEKVLSELKTLKGK HHHHEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PKTSLESGQVSPDFCLPNQEGNQICLENFKGQWAVLFFYPRDNTPGCSLEARSFSDLKK CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEECCCHHHHHH DFEAENAIILGVSRDGKESHRKFIEKKELKITLLSDEKAEIHEKYDVMHPKNFRGNEVIS HHCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHH TVRTTFLINPEGKIEKVWNNVKAAGHAEKVLSELKTLKGK HHHHEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]