Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226922

Identifier: 21226922

GI number: 21226922

Start: 972172

End: 972576

Strand: Direct

Name: 21226922

Synonym: MM_0820

Alternate gene names: NA

Gene position: 972172-972576 (Clockwise)

Preceding gene: 21226918

Following gene: 21226925

Centisome position: 23.73

GC content: 41.48

Gene sequence:

>405_bases
ATGAAATCATTCGCGTTAGTCCGGGCAGACGACTCGGATAAAGTAAAAATAGCATTACATGACCTAGAAAGATACGGACA
TATTCAATTTTCAGCGACTCCTAAATGTATTGAGCCAAATTATGCTGATGAACTTCTTGTGAGTGTAATGGGCGTATCAC
TCAAGTCAAAATGCAACTCTGCAGCCCTTGTAGAGTTAAATAACCACGCGGGAGCGGCGATAAGCAGGTTGAAGAAGATC
CACCCCCCTGCGCATATAATAATTATCAGTCCAAGACATAAAATGTTTGAAGAACTGGCTGGCAAATTTCCAAAATATCC
GGAATTTGACAGGACATTCAATCATCAAAAGAGCCCTCAAGGCCTGGATATGATTCAGGAGAAAGGAGAATCATCCAACG
CATAA

Upstream 100 bases:

>100_bases
ATAATGGTCGCCTGCTAAGCCATTTCATACACAAAGTTTATTATAGGGGTAAATCCATATCGAAATGGGGATAACTTTAT
AGATTGGTGGTGTGTAAAAA

Downstream 100 bases:

>100_bases
GGGATAAAAGTTTTTTAACCGGATGTAAGTATTGATCTTCAAATCTTCATTTTTTCTTTTTTAAAATATATTGAGAATAA
GGGCACTTTACCGGATAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNSAALVELNNHAGAAISRLKKI
HPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQGLDMIQEKGESSNA

Sequences:

>Translated_134_residues
MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNSAALVELNNHAGAAISRLKKI
HPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQGLDMIQEKGESSNA
>Mature_134_residues
MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNSAALVELNNHAGAAISRLKKI
HPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQGLDMIQEKGESSNA

Specific function: Unknown

COG id: COG1844

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR007154 [H]

Pfam domain/function: PF04009 DUF356 [H]

EC number: NA

Molecular weight: Translated: 14955; Mature: 14955

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNS
CCCCEEEECCCCCEEEEEEEEHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCHHHCCCCC
AALVELNNHAGAAISRLKKIHPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQ
EEEEEECCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GLDMIQEKGESSNA
HHHHHHHCCCCCCC
>Mature Secondary Structure
MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNS
CCCCEEEECCCCCEEEEEEEEHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCHHHCCCCC
AALVELNNHAGAAISRLKKIHPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQ
EEEEEECCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GLDMIQEKGESSNA
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]