| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226922
Identifier: 21226922
GI number: 21226922
Start: 972172
End: 972576
Strand: Direct
Name: 21226922
Synonym: MM_0820
Alternate gene names: NA
Gene position: 972172-972576 (Clockwise)
Preceding gene: 21226918
Following gene: 21226925
Centisome position: 23.73
GC content: 41.48
Gene sequence:
>405_bases ATGAAATCATTCGCGTTAGTCCGGGCAGACGACTCGGATAAAGTAAAAATAGCATTACATGACCTAGAAAGATACGGACA TATTCAATTTTCAGCGACTCCTAAATGTATTGAGCCAAATTATGCTGATGAACTTCTTGTGAGTGTAATGGGCGTATCAC TCAAGTCAAAATGCAACTCTGCAGCCCTTGTAGAGTTAAATAACCACGCGGGAGCGGCGATAAGCAGGTTGAAGAAGATC CACCCCCCTGCGCATATAATAATTATCAGTCCAAGACATAAAATGTTTGAAGAACTGGCTGGCAAATTTCCAAAATATCC GGAATTTGACAGGACATTCAATCATCAAAAGAGCCCTCAAGGCCTGGATATGATTCAGGAGAAAGGAGAATCATCCAACG CATAA
Upstream 100 bases:
>100_bases ATAATGGTCGCCTGCTAAGCCATTTCATACACAAAGTTTATTATAGGGGTAAATCCATATCGAAATGGGGATAACTTTAT AGATTGGTGGTGTGTAAAAA
Downstream 100 bases:
>100_bases GGGATAAAAGTTTTTTAACCGGATGTAAGTATTGATCTTCAAATCTTCATTTTTTCTTTTTTAAAATATATTGAGAATAA GGGCACTTTACCGGATAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNSAALVELNNHAGAAISRLKKI HPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQGLDMIQEKGESSNA
Sequences:
>Translated_134_residues MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNSAALVELNNHAGAAISRLKKI HPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQGLDMIQEKGESSNA >Mature_134_residues MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNSAALVELNNHAGAAISRLKKI HPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQGLDMIQEKGESSNA
Specific function: Unknown
COG id: COG1844
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016192 - InterPro: IPR007154 [H]
Pfam domain/function: PF04009 DUF356 [H]
EC number: NA
Molecular weight: Translated: 14955; Mature: 14955
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNS CCCCEEEECCCCCEEEEEEEEHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCHHHCCCCC AALVELNNHAGAAISRLKKIHPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQ EEEEEECCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC GLDMIQEKGESSNA HHHHHHHCCCCCCC >Mature Secondary Structure MKSFALVRADDSDKVKIALHDLERYGHIQFSATPKCIEPNYADELLVSVMGVSLKSKCNS CCCCEEEECCCCCEEEEEEEEHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCHHHCCCCC AALVELNNHAGAAISRLKKIHPPAHIIIISPRHKMFEELAGKFPKYPEFDRTFNHQKSPQ EEEEEECCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC GLDMIQEKGESSNA HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]