| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226899
Identifier: 21226899
GI number: 21226899
Start: 951126
End: 951695
Strand: Direct
Name: 21226899
Synonym: MM_0797
Alternate gene names: NA
Gene position: 951126-951695 (Clockwise)
Preceding gene: 21226893
Following gene: 21226901
Centisome position: 23.22
GC content: 36.32
Gene sequence:
>570_bases TTGAATACACACCGCATTTCTACCACAATCTCGCAGAAACACTGGGAATTATTAAAAAAGCACGCAGAAAAATTTGAAAC GCAGCAAAAAGCCCTGGAGCTTGCACTGGAAAGTCTAGAAAATGGCTCAAGGCAGATTCCAGAATTAACCCTAGAAGAGA AATATTGGATGCGCCTTAAACCGGCAAAATCCCTGGTTATCATCGAAAAAACTGCCTTTAAATCATTAATAGAAACCGCT GATATTGAACTATTAAGTGAGCTTTTTGTCCGAAACAAAATCATAGAATATACGATCGAGTTCTACTTTCAGAAATCTCT GGAAGAATGTAGTCTTAACGAAGTTATAGATGGTCTGGTTATAAATCTCAAGATAACTAACTGGGTTGATACTGTAGATT ATACAGATTATGGCAGTTATTATAAGCTGGCAATAACCCACGACCTTGGCCTCACTTTTGCCGAATTACTTACAATATGG ATAGACAACATGTTTAAAATTCATGGAGTCAGGGTAGAGAGTATACATTCCACAAAAACGATCTTCACGAAAATATTTAA AAACAAATAG
Upstream 100 bases:
>100_bases GGTGATACAATAATATATGTTTAAAATGCGCAGAATACGTTTGATATGCGCATAGAAATCAAAGAATTTGAAAAGAGAAT GAAATTACAGGGGGTAATAT
Downstream 100 bases:
>100_bases TTGACACTCTTAAATTCTACTTATCTGAGATCAATTTAATGATTTACACTTTATTTAAAGTTCAGCTGCAAAATCTAAAT TAAGATCAAAAGGCGCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNTHRISTTISQKHWELLKKHAEKFETQQKALELALESLENGSRQIPELTLEEKYWMRLKPAKSLVIIEKTAFKSLIETA DIELLSELFVRNKIIEYTIEFYFQKSLEECSLNEVIDGLVINLKITNWVDTVDYTDYGSYYKLAITHDLGLTFAELLTIW IDNMFKIHGVRVESIHSTKTIFTKIFKNK
Sequences:
>Translated_189_residues MNTHRISTTISQKHWELLKKHAEKFETQQKALELALESLENGSRQIPELTLEEKYWMRLKPAKSLVIIEKTAFKSLIETA DIELLSELFVRNKIIEYTIEFYFQKSLEECSLNEVIDGLVINLKITNWVDTVDYTDYGSYYKLAITHDLGLTFAELLTIW IDNMFKIHGVRVESIHSTKTIFTKIFKNK >Mature_189_residues MNTHRISTTISQKHWELLKKHAEKFETQQKALELALESLENGSRQIPELTLEEKYWMRLKPAKSLVIIEKTAFKSLIETA DIELLSELFVRNKIIEYTIEFYFQKSLEECSLNEVIDGLVINLKITNWVDTVDYTDYGSYYKLAITHDLGLTFAELLTIW IDNMFKIHGVRVESIHSTKTIFTKIFKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22178; Mature: 22178
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTHRISTTISQKHWELLKKHAEKFETQQKALELALESLENGSRQIPELTLEEKYWMRLK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEC PAKSLVIIEKTAFKSLIETADIELLSELFVRNKIIEYTIEFYFQKSLEECSLNEVIDGLV CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEE INLKITNWVDTVDYTDYGSYYKLAITHDLGLTFAELLTIWIDNMFKIHGVRVESIHSTKT EEEEEECEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHH IFTKIFKNK HHHHHHCCC >Mature Secondary Structure MNTHRISTTISQKHWELLKKHAEKFETQQKALELALESLENGSRQIPELTLEEKYWMRLK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEC PAKSLVIIEKTAFKSLIETADIELLSELFVRNKIIEYTIEFYFQKSLEECSLNEVIDGLV CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEE INLKITNWVDTVDYTDYGSYYKLAITHDLGLTFAELLTIWIDNMFKIHGVRVESIHSTKT EEEEEECEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHH IFTKIFKNK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA