| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226877
Identifier: 21226877
GI number: 21226877
Start: 925877
End: 927361
Strand: Direct
Name: 21226877
Synonym: MM_0775
Alternate gene names: NA
Gene position: 925877-927361 (Clockwise)
Preceding gene: 21226875
Following gene: 21226893
Centisome position: 22.6
GC content: 40.74
Gene sequence:
>1485_bases ATGAGCGGGAAGCAGTTTTTTGAAGCCCGAGCCGAAAATGACGGAATCTATGTTGACAACCTGAAAAATCAGCCTTTTCT CCCATGGAGAGCATTTTACGAGACAGTTAATTTCCTTCAAAAAAATTGTGGAAAGGCAAAAAAAGGAAATGCGACAGGCT CAAGGCTGGGAGATACAAACCTTGACCTGAACACCGTTGAAGGGTATATTGCCAGTGAAGTCTACGGCTGCAAAACAGGA GAAACCGTATTTAAGAGGATAACATCAATAGCCTCTATTCTCGACTGGGCTGAAATCTGCGAAAACACGAGGGGGCAGCT CGTCCTTCTTACAGAAAAAGAAGGAAGAGAAAAGGGAGAGTTTATAAATGCCCTTAATATCCAGCTTTTAAAAAAGGATT CCGAGCTAAACAGCCTGGAAACAAAGCTTTCGGAAAGCCTGCAGAGAATTGAAGAACTTGAAGAACAGGTTGCAGGCAGG GACAGGGAGATTGCCACCCTGAAAGAAGGGCTCGAAGCAAAAACAGGAAACGTGAATATTCTTGAGAAATCCCTGTCGAG CTCACAGGAAATCATAAAAGACTTTGAAGAAAAGATTAAAGAGAAAGAAATAGAGATCAAAGAAATTGACAGACTTACTT CTGAAAAGGCAGATAAAATCGGGAAATTCGAACAGGAAAGAATTGAAAAGGAAGAAGAAATAGGAAACCTTCGGAATTGC CTTGCTAAAAGGGACGAAGCTGTAAAAGACCTGGAAGGTCAGCTCATTAAAAAAGAGGAAGCAATAAATGGACTCGAAAG CAGGATCGCTCAAAAAAGCAGTGTTCTTGAAGAACTAAAATCCCGGCTGAATGAAAGGGAAGAAGCCATAACCGTTTATG AAAAGGATATTCAGGAAAAAGGCTCAAGAATTCAGGAACTGAGTGAGACTATTTCAGACAGGAATAAGGGAATAGAAGAA CTTGAGTCCAGGCTTGATGAAAAAGAACAGGAGAAAAGTAACCTTGAGGAGTCACTCAGGGCAAAAATAGAAGAAATAAA AGTCATTCATGAAAAATTCCTTGAAAAAGAAAGAGCTGTGGAAAAGCTTGAAGAAAGCATTTCAGTGAGGGACAGGGACA TTAAAACTCTTGCTGACGAGGTAATCACAAAGAGCGGGGAAATGAAGAGAATTGAGGAAAAACTGACCGCTAAAGAGAGA AAGATAAATACACTGGAATCCATGCTTGCAACGAGCGGAGAAAGAGTAAAAAAGCTCGAAAAGCAGATCTCGGAATATAA AGGGGAAGAAAAACTCGCAGAAGAGCTGATGGAAAAAGACGAGCTGGTAAAACAGCTTAAAAGAACGCTCGTAAGTAAAG AAGAAGAAGTTTCCCGGCTTAACGAAGAAAACAGAAGATACAGGCTGCAGCAGAAATATTCATCTGAAGGATTAAAGCAG ATAGAAGAGCAAAAAGCCTCAAAGAAGTGGTGGAAACGCCTTTAA
Upstream 100 bases:
>100_bases TCAGACACTACTTTAAAGAGGCTCATGCATGGAAGATCCTGTTATCTCAAGAATAAAAAACCAGTTTGATAAGAAAGGAA ATCCGGCAAAGATTCCGCTT
Downstream 100 bases:
>100_bases GCCTGAAATAACACTTTTTCTTAAAACTGGCTTCAAAACTTAAACTCTATTCATTTCCGGTCTTTCAGAGCCCGGTGAAA GGAAAGAACTGTGAAGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSGKQFFEARAENDGIYVDNLKNQPFLPWRAFYETVNFLQKNCGKAKKGNATGSRLGDTNLDLNTVEGYIASEVYGCKTG ETVFKRITSIASILDWAEICENTRGQLVLLTEKEGREKGEFINALNIQLLKKDSELNSLETKLSESLQRIEELEEQVAGR DREIATLKEGLEAKTGNVNILEKSLSSSQEIIKDFEEKIKEKEIEIKEIDRLTSEKADKIGKFEQERIEKEEEIGNLRNC LAKRDEAVKDLEGQLIKKEEAINGLESRIAQKSSVLEELKSRLNEREEAITVYEKDIQEKGSRIQELSETISDRNKGIEE LESRLDEKEQEKSNLEESLRAKIEEIKVIHEKFLEKERAVEKLEESISVRDRDIKTLADEVITKSGEMKRIEEKLTAKER KINTLESMLATSGERVKKLEKQISEYKGEEKLAEELMEKDELVKQLKRTLVSKEEEVSRLNEENRRYRLQQKYSSEGLKQ IEEQKASKKWWKRL
Sequences:
>Translated_494_residues MSGKQFFEARAENDGIYVDNLKNQPFLPWRAFYETVNFLQKNCGKAKKGNATGSRLGDTNLDLNTVEGYIASEVYGCKTG ETVFKRITSIASILDWAEICENTRGQLVLLTEKEGREKGEFINALNIQLLKKDSELNSLETKLSESLQRIEELEEQVAGR DREIATLKEGLEAKTGNVNILEKSLSSSQEIIKDFEEKIKEKEIEIKEIDRLTSEKADKIGKFEQERIEKEEEIGNLRNC LAKRDEAVKDLEGQLIKKEEAINGLESRIAQKSSVLEELKSRLNEREEAITVYEKDIQEKGSRIQELSETISDRNKGIEE LESRLDEKEQEKSNLEESLRAKIEEIKVIHEKFLEKERAVEKLEESISVRDRDIKTLADEVITKSGEMKRIEEKLTAKER KINTLESMLATSGERVKKLEKQISEYKGEEKLAEELMEKDELVKQLKRTLVSKEEEVSRLNEENRRYRLQQKYSSEGLKQ IEEQKASKKWWKRL >Mature_493_residues SGKQFFEARAENDGIYVDNLKNQPFLPWRAFYETVNFLQKNCGKAKKGNATGSRLGDTNLDLNTVEGYIASEVYGCKTGE TVFKRITSIASILDWAEICENTRGQLVLLTEKEGREKGEFINALNIQLLKKDSELNSLETKLSESLQRIEELEEQVAGRD REIATLKEGLEAKTGNVNILEKSLSSSQEIIKDFEEKIKEKEIEIKEIDRLTSEKADKIGKFEQERIEKEEEIGNLRNCL AKRDEAVKDLEGQLIKKEEAINGLESRIAQKSSVLEELKSRLNEREEAITVYEKDIQEKGSRIQELSETISDRNKGIEEL ESRLDEKEQEKSNLEESLRAKIEEIKVIHEKFLEKERAVEKLEESISVRDRDIKTLADEVITKSGEMKRIEEKLTAKERK INTLESMLATSGERVKKLEKQISEYKGEEKLAEELMEKDELVKQLKRTLVSKEEEVSRLNEENRRYRLQQKYSSEGLKQI EEQKASKKWWKRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57190; Mature: 57059
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKQFFEARAENDGIYVDNLKNQPFLPWRAFYETVNFLQKNCGKAKKGNATGSRLGDTN CCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC LDLNTVEGYIASEVYGCKTGETVFKRITSIASILDWAEICENTRGQLVLLTEKEGREKGE CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH FINALNIQLLKKDSELNSLETKLSESLQRIEELEEQVAGRDREIATLKEGLEAKTGNVNI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH LEKSLSSSQEIIKDFEEKIKEKEIEIKEIDRLTSEKADKIGKFEQERIEKEEEIGNLRNC HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LAKRDEAVKDLEGQLIKKEEAINGLESRIAQKSSVLEELKSRLNEREEAITVYEKDIQEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSRIQELSETISDRNKGIEELESRLDEKEQEKSNLEESLRAKIEEIKVIHEKFLEKERAV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLEESISVRDRDIKTLADEVITKSGEMKRIEEKLTAKERKINTLESMLATSGERVKKLE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH KQISEYKGEEKLAEELMEKDELVKQLKRTLVSKEEEVSRLNEENRRYRLQQKYSSEGLKQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IEEQKASKKWWKRL HHHHHHHHHHHHCC >Mature Secondary Structure SGKQFFEARAENDGIYVDNLKNQPFLPWRAFYETVNFLQKNCGKAKKGNATGSRLGDTN CCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC LDLNTVEGYIASEVYGCKTGETVFKRITSIASILDWAEICENTRGQLVLLTEKEGREKGE CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH FINALNIQLLKKDSELNSLETKLSESLQRIEELEEQVAGRDREIATLKEGLEAKTGNVNI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH LEKSLSSSQEIIKDFEEKIKEKEIEIKEIDRLTSEKADKIGKFEQERIEKEEEIGNLRNC HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LAKRDEAVKDLEGQLIKKEEAINGLESRIAQKSSVLEELKSRLNEREEAITVYEKDIQEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSRIQELSETISDRNKGIEELESRLDEKEQEKSNLEESLRAKIEEIKVIHEKFLEKERAV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLEESISVRDRDIKTLADEVITKSGEMKRIEEKLTAKERKINTLESMLATSGERVKKLE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH KQISEYKGEEKLAEELMEKDELVKQLKRTLVSKEEEVSRLNEENRRYRLQQKYSSEGLKQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IEEQKASKKWWKRL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA