| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is modB [H]
Identifier: 21226829
GI number: 21226829
Start: 874974
End: 875639
Strand: Direct
Name: modB [H]
Synonym: MM_0727
Alternate gene names: 21226829
Gene position: 874974-875639 (Clockwise)
Preceding gene: 21226828
Following gene: 21226830
Centisome position: 21.36
GC content: 47.3
Gene sequence:
>666_bases ATGGAAATGTTTCAGGTGGTCATGAGCCCTCTTTTGCTTACTCTCAAAATTGCCGCAGTTTCAACCTTCTTTGTGACATT TCTGGGTATTCTGATCGCCTATGTGCTGGCAAAAAAAGAGTTTAGCGGAAAATGGCTGGCTGATGCGCTCGTGACCCTTC CCCTTATTCTGCCACCAACTGTAACCGGTTATATTCTGGTTATTCTCCTCGGTAAAAACGGAATTTTAGGAAATATCTTT ACCGAAATTACGGGAAAAGGCATACTTTTTACCTGGCAGGCAGCAGCCATTGCAGCCTTTGTAGTCTCTTTGCCCCTGAT GGTAAAAACTGCCGCCTCAGCCATAGGGACTGTGGACAGGAGTGTTGAGGAAGCAGCCCGTATCCTCGGGAGAAACGAAC TGGAAACTGCTCTCTTCATAACCCTGCCTCTTGCAAAAAAAGGCGTCATCGCAGGCTGTATTCTGAGTTTTGCAAGAGCA GTCGGAGAGTTTGGGGCAACCCTGATGGTTGCTGGAAATATTCCGGGAAAGACAGGCACAATGCCTCTTTCCATCTATGG GGCATACCAGACCGGAAATAATGAACTTGCCAGCCTGCTTGTGATAGTTCTGGTTGCCATATCCTTCCTGACCATTGCAG CAACCAGCAGGCTTGCTGAAAAATAA
Upstream 100 bases:
>100_bases AAATCAAAATTACAGATTGAAGGACTTTGTAAATTGAAAAAGTAAGGATAAGATTCAGGCTTTTAACCAGAACAGGGCCT GAAAATTTGGAAGGGATTTA
Downstream 100 bases:
>100_bases GAGGTGAAGGCTGAATGACTATTGAAGTTGACATTGAGAAGGAATTCTACGGAAGAAAACATGGGAAGAAAGGAGAAAAC CCGAGCTTTTCAATGAACTG
Product: molybdenum ABC transporter permease
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MEMFQVVMSPLLLTLKIAAVSTFFVTFLGILIAYVLAKKEFSGKWLADALVTLPLILPPTVTGYILVILLGKNGILGNIF TEITGKGILFTWQAAAIAAFVVSLPLMVKTAASAIGTVDRSVEEAARILGRNELETALFITLPLAKKGVIAGCILSFARA VGEFGATLMVAGNIPGKTGTMPLSIYGAYQTGNNELASLLVIVLVAISFLTIAATSRLAEK
Sequences:
>Translated_221_residues MEMFQVVMSPLLLTLKIAAVSTFFVTFLGILIAYVLAKKEFSGKWLADALVTLPLILPPTVTGYILVILLGKNGILGNIF TEITGKGILFTWQAAAIAAFVVSLPLMVKTAASAIGTVDRSVEEAARILGRNELETALFITLPLAKKGVIAGCILSFARA VGEFGATLMVAGNIPGKTGTMPLSIYGAYQTGNNELASLLVIVLVAISFLTIAATSRLAEK >Mature_221_residues MEMFQVVMSPLLLTLKIAAVSTFFVTFLGILIAYVLAKKEFSGKWLADALVTLPLILPPTVTGYILVILLGKNGILGNIF TEITGKGILFTWQAAAIAAFVVSLPLMVKTAASAIGTVDRSVEEAARILGRNELETALFITLPLAKKGVIAGCILSFARA VGEFGATLMVAGNIPGKTGTMPLSIYGAYQTGNNELASLLVIVLVAISFLTIAATSRLAEK
Specific function: could be part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=211, Percent_Identity=39.3364928909953, Blast_Score=131, Evalue=3e-32, Organism=Escherichia coli, GI1788764, Length=208, Percent_Identity=32.6923076923077, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI87082099, Length=219, Percent_Identity=29.2237442922374, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787369, Length=175, Percent_Identity=32.5714285714286, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1787080, Length=157, Percent_Identity=33.7579617834395, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23276; Mature: 23276
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMFQVVMSPLLLTLKIAAVSTFFVTFLGILIAYVLAKKEFSGKWLADALVTLPLILPPT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC VTGYILVILLGKNGILGNIFTEITGKGILFTWQAAAIAAFVVSLPLMVKTAASAIGTVDR HHHHEEEEEECCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVEEAARILGRNELETALFITLPLAKKGVIAGCILSFARAVGEFGATLMVAGNIPGKTGT HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC MPLSIYGAYQTGNNELASLLVIVLVAISFLTIAATSRLAEK CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEMFQVVMSPLLLTLKIAAVSTFFVTFLGILIAYVLAKKEFSGKWLADALVTLPLILPPT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC VTGYILVILLGKNGILGNIFTEITGKGILFTWQAAAIAAFVVSLPLMVKTAASAIGTVDR HHHHEEEEEECCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVEEAARILGRNELETALFITLPLAKKGVIAGCILSFARAVGEFGATLMVAGNIPGKTGT HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC MPLSIYGAYQTGNNELASLLVIVLVAISFLTIAATSRLAEK CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]