| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yjjG [C]
Identifier: 21226415
GI number: 21226415
Start: 417424
End: 418077
Strand: Direct
Name: yjjG [C]
Synonym: MM_0313
Alternate gene names: 21226415
Gene position: 417424-418077 (Clockwise)
Preceding gene: 21226414
Following gene: 21226416
Centisome position: 10.19
GC content: 45.41
Gene sequence:
>654_bases ATGCTCCAGAATGGAAAAATCAAAGGTCTGATCTTTGACTGCTACAAAACCCTTATTGATATCAAAACTGACGAAAAAAG CAGGGAGACAAACAAGAGAGTAAGCAGCTGGCTGCTTTACCAGGGAGTGAGGATTGAACCTGATAGGCTCAGGGAAGAGT ACAGATGGAAAGTTGCAGGCAGGCTGGGCAACTCAGGCCAGCAGTATCCGGACATCCGCATAGAAGAGATTTTTGCCGAG ATCTGTGCAGAAAATGCCTTCAGAGCAATTGACCCGTACTGGCTCGGTATTGAAACTGCAAAGGTCTTCAGGACCGCTTC ATTAAGAAAACTTGAAGCTTACCCTAAGAGTTTCAGGCTTCTTGAAAAATACAGAAACGTTCCTAAATGCATTGTCTCTA ACGCCCAGAGGGTTTTTACAGAACAGGAACTCCGCTTCCTTGGTTTATACGACCGCTTCAATTTTGTAATCATGTCCTCA GACCACAGAATCAAAAAACCTGATACAAAGCTTTTCAAAATGGCTCTTGACCGCCTCGGGCTTGAACCATGGGAAGTGCT CTCAATCGGGGACACTCCGGAAAACGATATATATGCCCCTCAAAGCCTTGGCATGAATGCGATGCATATCCGGGATGCCT GGAGATATGCATAA
Upstream 100 bases:
>100_bases TATATACTAAAAAAGCCATAACAATATTTATAGAGAAAAGAATAGAAACAAAGTTCAATCTATAAAATAGAGCTAATAAA AACATATAAGAGGATGCTTT
Downstream 100 bases:
>100_bases TTATTGACAGTATAGCATAAAATCCACGTTAATATTTTGATACATTTTCGCTTGTGCTGGTTCAGTAAATATGATCCAGT AGATGCAATCCTTACAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: HAD Family Hydrolase; Haloacid Dehalogenase; HAD-Superfamily Hydrolase / Phosphatase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase Family Protein; Halo Acid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; HAD Superfamily Hydrolase
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAGRLGNSGQQYPDIRIEEIFAE ICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRLLEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSS DHRIKKPDTKLFKMALDRLGLEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA
Sequences:
>Translated_217_residues MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAGRLGNSGQQYPDIRIEEIFAE ICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRLLEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSS DHRIKKPDTKLFKMALDRLGLEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA >Mature_217_residues MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAGRLGNSGQQYPDIRIEEIFAE ICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRLLEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSS DHRIKKPDTKLFKMALDRLGLEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25538; Mature: 25538
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAG CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RLGNSGQQYPDIRIEEIFAEICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRL CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCEEECHHHHHHHHHHHHHHHHHCHHHHHH LEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSSDHRIKKPDTKLFKMALDRLG HHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHC LEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA CCCCEEEECCCCCCCCCCCCHHCCCCHHHHHHHHCCC >Mature Secondary Structure MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAG CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RLGNSGQQYPDIRIEEIFAEICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRL CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCEEECHHHHHHHHHHHHHHHHHCHHHHHH LEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSSDHRIKKPDTKLFKMALDRLG HHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHC LEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA CCCCEEEECCCCCCCCCCCCHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA