Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is yjjG [C]

Identifier: 21226415

GI number: 21226415

Start: 417424

End: 418077

Strand: Direct

Name: yjjG [C]

Synonym: MM_0313

Alternate gene names: 21226415

Gene position: 417424-418077 (Clockwise)

Preceding gene: 21226414

Following gene: 21226416

Centisome position: 10.19

GC content: 45.41

Gene sequence:

>654_bases
ATGCTCCAGAATGGAAAAATCAAAGGTCTGATCTTTGACTGCTACAAAACCCTTATTGATATCAAAACTGACGAAAAAAG
CAGGGAGACAAACAAGAGAGTAAGCAGCTGGCTGCTTTACCAGGGAGTGAGGATTGAACCTGATAGGCTCAGGGAAGAGT
ACAGATGGAAAGTTGCAGGCAGGCTGGGCAACTCAGGCCAGCAGTATCCGGACATCCGCATAGAAGAGATTTTTGCCGAG
ATCTGTGCAGAAAATGCCTTCAGAGCAATTGACCCGTACTGGCTCGGTATTGAAACTGCAAAGGTCTTCAGGACCGCTTC
ATTAAGAAAACTTGAAGCTTACCCTAAGAGTTTCAGGCTTCTTGAAAAATACAGAAACGTTCCTAAATGCATTGTCTCTA
ACGCCCAGAGGGTTTTTACAGAACAGGAACTCCGCTTCCTTGGTTTATACGACCGCTTCAATTTTGTAATCATGTCCTCA
GACCACAGAATCAAAAAACCTGATACAAAGCTTTTCAAAATGGCTCTTGACCGCCTCGGGCTTGAACCATGGGAAGTGCT
CTCAATCGGGGACACTCCGGAAAACGATATATATGCCCCTCAAAGCCTTGGCATGAATGCGATGCATATCCGGGATGCCT
GGAGATATGCATAA

Upstream 100 bases:

>100_bases
TATATACTAAAAAAGCCATAACAATATTTATAGAGAAAAGAATAGAAACAAAGTTCAATCTATAAAATAGAGCTAATAAA
AACATATAAGAGGATGCTTT

Downstream 100 bases:

>100_bases
TTATTGACAGTATAGCATAAAATCCACGTTAATATTTTGATACATTTTCGCTTGTGCTGGTTCAGTAAATATGATCCAGT
AGATGCAATCCTTACAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: HAD Family Hydrolase; Haloacid Dehalogenase; HAD-Superfamily Hydrolase / Phosphatase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase Family Protein; Halo Acid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; HAD Superfamily Hydrolase

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAGRLGNSGQQYPDIRIEEIFAE
ICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRLLEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSS
DHRIKKPDTKLFKMALDRLGLEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA

Sequences:

>Translated_217_residues
MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAGRLGNSGQQYPDIRIEEIFAE
ICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRLLEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSS
DHRIKKPDTKLFKMALDRLGLEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA
>Mature_217_residues
MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAGRLGNSGQQYPDIRIEEIFAE
ICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRLLEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSS
DHRIKKPDTKLFKMALDRLGLEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25538; Mature: 25538

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAG
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RLGNSGQQYPDIRIEEIFAEICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRL
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCEEECHHHHHHHHHHHHHHHHHCHHHHHH
LEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSSDHRIKKPDTKLFKMALDRLG
HHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHC
LEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA
CCCCEEEECCCCCCCCCCCCHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLQNGKIKGLIFDCYKTLIDIKTDEKSRETNKRVSSWLLYQGVRIEPDRLREEYRWKVAG
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RLGNSGQQYPDIRIEEIFAEICAENAFRAIDPYWLGIETAKVFRTASLRKLEAYPKSFRL
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCEEECHHHHHHHHHHHHHHHHHCHHHHHH
LEKYRNVPKCIVSNAQRVFTEQELRFLGLYDRFNFVIMSSDHRIKKPDTKLFKMALDRLG
HHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHC
LEPWEVLSIGDTPENDIYAPQSLGMNAMHIRDAWRYA
CCCCEEEECCCCCCCCCCCCHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA