Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224912

Identifier: 212224912

GI number: 212224912

Start: 1625000

End: 1625902

Strand: Reverse

Name: 212224912

Synonym: TON_1761

Alternate gene names: NA

Gene position: 1625902-1625000 (Counterclockwise)

Preceding gene: 212224913

Following gene: 212224911

Centisome position: 88.0

GC content: 51.61

Gene sequence:

>903_bases
GTGAAATATTCGTGGGAAGAATTCGCGAGAAAAATGGGTGTTGAGCCTCAGATTCTGGAGAACGAAGAGGCGAGACTGTT
AAAGAGGTTCGTTGACGATCTGGTCTATCCGTCCCACTGTCAGTTCTGTCAGGGACTGGATCTGAGCAATCCCAATCCGG
TTCATCATCCAAGCTACGAGCTTACTCCAGCATGCAACCACGACTGCATATTCTGCTATTCAAACGTGGCAGTAAAGCTT
GGAAAGGCACCGAAGCCGGGCTATTACGGCTGGGAAAACCCAAAGGCAATAACGGTTTCACAGTACGGGGAGCCACTGTT
TTCACCTAGGATAGTGGAAGTCAACAGAATGCTCCGCGAGAGGTTTCCGGAGGCCAGACTTGATCTACAGACCAACGGTT
CCCTCTTAACGGAAGAGCTCTGGCAGAAACTGGACTTTGACCTCGTTATGATAAGCCTCGACGCGGCCACCAGGGAGAAG
CACCTGGCCATAACCAACGCTGACACCTTCGACAACGTCGTCAACGCGCTCAGAATAGTTGGGAGAGATAAATCCGTCCG
CTCCATCGTTAGGACGATATTCATGCCGGGAATAAACGACGAGGACATACCGAAGATAGCCGAATTAGCAGCTTCACTTG
GCGTGGACGAGATGATGCTCCAGCCGCTAACGGTGCACGAGCTGAACGTTGAGCGGCTGAGAAAAGCAGGTCTTGACTTT
GAGAGGGCAGAAAGTATCCGGGAGTACCTCAAGGCCGCAATGAAGGCGAAGGAATATATAGATGTCCGCATAAGCGGCTG
TCAGCTGGCGATATATCGGACAATGGATCCTCTGACGCTTTTCAGCGCGAGAAGGATTGCAAGGGATGTTGCCCCTCTTG
TGAAGCGGAAGCGGCTTCTTTAG

Upstream 100 bases:

>100_bases
TTGTAAAGATGGTCCTGTCTTCGACGGCTCAAAGCTCATGGAACTTCTTTGACCAATCATATTTTTAAACTCCTTTTCTC
CTCCACCCTCGGTGAGAACC

Downstream 100 bases:

>100_bases
TTACCACTCGTAAGTTTTAAGTATTTTTATTTTCCAAGACACCCTTCGGTGAGCGCCATGCTCCATGAGATTCTTGCGTA
GTTTTTTCTGCTGGGATTTC

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYELTPACNHDCIFCYSNVAVKL
GKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRERFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREK
HLAITNADTFDNVVNALRIVGRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF
ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL

Sequences:

>Translated_300_residues
MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYELTPACNHDCIFCYSNVAVKL
GKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRERFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREK
HLAITNADTFDNVVNALRIVGRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF
ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL
>Mature_300_residues
MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYELTPACNHDCIFCYSNVAVKL
GKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRERFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREK
HLAITNADTFDNVVNALRIVGRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF
ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34369; Mature: 34369

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYE
CCCCHHHHHHHCCCCCCHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCC
LTPACNHDCIFCYSNVAVKLGKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRE
CCCCCCCCEEEEECCHHHEECCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHH
RFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREKHLAITNADTFDNVVNALRIV
HCCHHHEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHH
GRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHCCHHHHHHHCCCH
ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL
HHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYE
CCCCHHHHHHHCCCCCCHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCC
LTPACNHDCIFCYSNVAVKLGKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRE
CCCCCCCCEEEEECCHHHEECCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHH
RFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREKHLAITNADTFDNVVNALRIV
HCCHHHEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHH
GRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHCCHHHHHHHCCCH
ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL
HHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]