| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224912
Identifier: 212224912
GI number: 212224912
Start: 1625000
End: 1625902
Strand: Reverse
Name: 212224912
Synonym: TON_1761
Alternate gene names: NA
Gene position: 1625902-1625000 (Counterclockwise)
Preceding gene: 212224913
Following gene: 212224911
Centisome position: 88.0
GC content: 51.61
Gene sequence:
>903_bases GTGAAATATTCGTGGGAAGAATTCGCGAGAAAAATGGGTGTTGAGCCTCAGATTCTGGAGAACGAAGAGGCGAGACTGTT AAAGAGGTTCGTTGACGATCTGGTCTATCCGTCCCACTGTCAGTTCTGTCAGGGACTGGATCTGAGCAATCCCAATCCGG TTCATCATCCAAGCTACGAGCTTACTCCAGCATGCAACCACGACTGCATATTCTGCTATTCAAACGTGGCAGTAAAGCTT GGAAAGGCACCGAAGCCGGGCTATTACGGCTGGGAAAACCCAAAGGCAATAACGGTTTCACAGTACGGGGAGCCACTGTT TTCACCTAGGATAGTGGAAGTCAACAGAATGCTCCGCGAGAGGTTTCCGGAGGCCAGACTTGATCTACAGACCAACGGTT CCCTCTTAACGGAAGAGCTCTGGCAGAAACTGGACTTTGACCTCGTTATGATAAGCCTCGACGCGGCCACCAGGGAGAAG CACCTGGCCATAACCAACGCTGACACCTTCGACAACGTCGTCAACGCGCTCAGAATAGTTGGGAGAGATAAATCCGTCCG CTCCATCGTTAGGACGATATTCATGCCGGGAATAAACGACGAGGACATACCGAAGATAGCCGAATTAGCAGCTTCACTTG GCGTGGACGAGATGATGCTCCAGCCGCTAACGGTGCACGAGCTGAACGTTGAGCGGCTGAGAAAAGCAGGTCTTGACTTT GAGAGGGCAGAAAGTATCCGGGAGTACCTCAAGGCCGCAATGAAGGCGAAGGAATATATAGATGTCCGCATAAGCGGCTG TCAGCTGGCGATATATCGGACAATGGATCCTCTGACGCTTTTCAGCGCGAGAAGGATTGCAAGGGATGTTGCCCCTCTTG TGAAGCGGAAGCGGCTTCTTTAG
Upstream 100 bases:
>100_bases TTGTAAAGATGGTCCTGTCTTCGACGGCTCAAAGCTCATGGAACTTCTTTGACCAATCATATTTTTAAACTCCTTTTCTC CTCCACCCTCGGTGAGAACC
Downstream 100 bases:
>100_bases TTACCACTCGTAAGTTTTAAGTATTTTTATTTTCCAAGACACCCTTCGGTGAGCGCCATGCTCCATGAGATTCTTGCGTA GTTTTTTCTGCTGGGATTTC
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYELTPACNHDCIFCYSNVAVKL GKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRERFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREK HLAITNADTFDNVVNALRIVGRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL
Sequences:
>Translated_300_residues MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYELTPACNHDCIFCYSNVAVKL GKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRERFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREK HLAITNADTFDNVVNALRIVGRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL >Mature_300_residues MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYELTPACNHDCIFCYSNVAVKL GKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRERFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREK HLAITNADTFDNVVNALRIVGRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR000385 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 34369; Mature: 34369
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYE CCCCHHHHHHHCCCCCCHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCC LTPACNHDCIFCYSNVAVKLGKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRE CCCCCCCCEEEEECCHHHEECCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHH RFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREKHLAITNADTFDNVVNALRIV HCCHHHEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHH GRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHCCHHHHHHHCCCH ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL HHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKYSWEEFARKMGVEPQILENEEARLLKRFVDDLVYPSHCQFCQGLDLSNPNPVHHPSYE CCCCHHHHHHHCCCCCCHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCC LTPACNHDCIFCYSNVAVKLGKAPKPGYYGWENPKAITVSQYGEPLFSPRIVEVNRMLRE CCCCCCCCEEEEECCHHHEECCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHH RFPEARLDLQTNGSLLTEELWQKLDFDLVMISLDAATREKHLAITNADTFDNVVNALRIV HCCHHHEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHH GRDKSVRSIVRTIFMPGINDEDIPKIAELAASLGVDEMMLQPLTVHELNVERLRKAGLDF CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHCCHHHHHHHCCCH ERAESIREYLKAAMKAKEYIDVRISGCQLAIYRTMDPLTLFSARRIARDVAPLVKRKRLL HHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]