| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224831
Identifier: 212224831
GI number: 212224831
Start: 1545238
End: 1545732
Strand: Reverse
Name: 212224831
Synonym: TON_1680
Alternate gene names: NA
Gene position: 1545732-1545238 (Counterclockwise)
Preceding gene: 212224837
Following gene: 212224829
Centisome position: 83.66
GC content: 51.31
Gene sequence:
>495_bases ATGGAGAAGATGCCAAAGCTTTACGTTGAAGTCCCCAAAGAGGGGTGTATCGAAAACAACAAGGCTTCGAGGGACTGTCT CATCATAATGAACAACGTTGAGGTATGGCTGAGGAAAGGTGAGAGTGTTCCAGAGTTCATCGACGTCGAGAAGGCCAAGT TCCTCGCCAAAGAAGTCTACGACAGGTTCTACCTTCACGTGGACAGACTCAAGGGCAGGATGGAGGTGGATGCCGTCCTT GTGCTCCCAGACGGGAGGACAAGAATATACCTAAGGAAAGGCGACGAGCTTCTCCTTCTCCCGGTCGAGGGCTACACTAA AACCCTCATAGCCAACGTGGGCAATCGCGTCAGAACCGGTGACGCCTTCGCAGCGGTAACGACAAAGAAGGGCGAAGTCC ACTATCTCAAGCCTCCCAAGACAGGAACGGTTGTCTTCATTGACGAAATAACCAATAGACCGCACTACGTCTACTACATT CTTCCGGAAGAGTAG
Upstream 100 bases:
>100_bases AGAGGGTTAGAAATTTTACCCTAGTGGACATTTTTATCGGGTGTAGTATGGAGGGCAGGTTTAAAAACTTTTACCCCCAG GTAAAGGTCAGGTGATATGT
Downstream 100 bases:
>100_bases TCCCCACCTTTGTCTAAATTTTTAGACGTTGGTAGGGATTCACTCTTTCATCCCAGCTATCATGGCGTCTATGCTCGACT TAAGGGCAAGTTTTATGCCG
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MEKMPKLYVEVPKEGCIENNKASRDCLIIMNNVEVWLRKGESVPEFIDVEKAKFLAKEVYDRFYLHVDRLKGRMEVDAVL VLPDGRTRIYLRKGDELLLLPVEGYTKTLIANVGNRVRTGDAFAAVTTKKGEVHYLKPPKTGTVVFIDEITNRPHYVYYI LPEE
Sequences:
>Translated_164_residues MEKMPKLYVEVPKEGCIENNKASRDCLIIMNNVEVWLRKGESVPEFIDVEKAKFLAKEVYDRFYLHVDRLKGRMEVDAVL VLPDGRTRIYLRKGDELLLLPVEGYTKTLIANVGNRVRTGDAFAAVTTKKGEVHYLKPPKTGTVVFIDEITNRPHYVYYI LPEE >Mature_164_residues MEKMPKLYVEVPKEGCIENNKASRDCLIIMNNVEVWLRKGESVPEFIDVEKAKFLAKEVYDRFYLHVDRLKGRMEVDAVL VLPDGRTRIYLRKGDELLLLPVEGYTKTLIANVGNRVRTGDAFAAVTTKKGEVHYLKPPKTGTVVFIDEITNRPHYVYYI LPEE
Specific function: Unknown
COG id: COG4072
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019217 - InterPro: IPR016749 [H]
Pfam domain/function: PF09891 DUF2118 [H]
EC number: NA
Molecular weight: Translated: 18902; Mature: 18902
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKMPKLYVEVPKEGCIENNKASRDCLIIMNNVEVWLRKGESVPEFIDVEKAKFLAKEVY CCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHH DRFYLHVDRLKGRMEVDAVLVLPDGRTRIYLRKGDELLLLPVEGYTKTLIANVGNRVRTG HHHEEEHHHHCCCEEEEEEEEEECCCEEEEEEECCEEEEEECCCCHHHHHHHCCCCEECC DAFAAVTTKKGEVHYLKPPKTGTVVFIDEITNRPHYVYYILPEE CEEEEEEECCCCEEEECCCCCCEEEEEECCCCCCCEEEEEEECC >Mature Secondary Structure MEKMPKLYVEVPKEGCIENNKASRDCLIIMNNVEVWLRKGESVPEFIDVEKAKFLAKEVY CCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHH DRFYLHVDRLKGRMEVDAVLVLPDGRTRIYLRKGDELLLLPVEGYTKTLIANVGNRVRTG HHHEEEHHHHCCCEEEEEEEEEECCCEEEEEEECCEEEEEECCCCHHHHHHHCCCCEECC DAFAAVTTKKGEVHYLKPPKTGTVVFIDEITNRPHYVYYILPEE CEEEEEEECCCCEEEECCCCCCEEEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]