| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224788
Identifier: 212224788
GI number: 212224788
Start: 1496507
End: 1497712
Strand: Reverse
Name: 212224788
Synonym: TON_1637
Alternate gene names: NA
Gene position: 1497712-1496507 (Counterclockwise)
Preceding gene: 212224790
Following gene: 212224787
Centisome position: 81.06
GC content: 52.32
Gene sequence:
>1206_bases ATGAAGAAGCTCATCGCGTTCATTCTGACGATCCTTCTTCTCACGCCCTTGGTCAGTGAGGTCAATGCCGCCGGGAACTC ACAGCCCCTTTTCAAGATCGAGATCATGATTCGGGTCTCGCCGGTGGTCATAAACGGCTCTTCCACCTGGATGGGCCAGT TCAGGATATATGCCACCCTCAAGGATCCGGGTTACAGGGCCTATTTTGACCATCTCGCGGCAAACAACACGACGAAGGCA AACGAGGAGTTCAGGTCATTCGTCAAACAGCTGATTTACGATAACCTGAAGAACAACTTCAAGGATCGTTTTGAGGCCAA AGGCATTAACAGCACAATTTACCTTCCCTCAGGAGGTCCGGTTAAAGTTCTCGACAACTGGTCTGCTGTCGTTACCTTTG CTCTCTCAAACTTCCTTGTCAGCGATGGAAAAATCATCAGCTGTCCTCTTAGCGGCCCGATGGACTTCGTCTTTAAGGGC CACGTTTTCGACTACAGCTGGGACAAGCTGACGGTCGTGCTTCCGAAGGACTACGAGGTGAGAAACCTTGCTCCTGCTCC TGACGACTTCAGTAACAACGTTGCCGTCTGGACCAACGGCGACTTCATACCCCTGATAGAGCTTTATACACCCGTGTATT CTTATGTGATATTTCTGAACTCGACCAGGAAGGAGATATCGCTCCAGTACGACCCCCACGAGGGCTACGTCCAGTTCAAT GCCACATTTACCGGTGCCAACGCAACGCCGGTAGTTATCGATCAGCTCCTCTCGAGCTTCAAGGCCACGATGGACATAAT AAGTCTGGACACCCGCGAGGAGAACGGCACCTTGGTTGTCATCGGTGTGGCAAAACCCAAGGTGGCCTACAGGGAGACCT CCTCCGAAAAGATATGGGAGGCCCTTCTTAAACTGCCCGGGTCGTTTGACAGGGTTTCAGTGGTGGGCGGCACCTACAAG ATGGCTCCCGACAACACCATCGTAATCACTGTGACTGAGAAAAAGACGAGCCGTCTGCCTTACATCTGGGCGGGCCTGAT TCTGGTTGTCGTTCTCGGAATACTCTGGATCAAGAGGCGTGGGACATCTTCAGAGGAGCCAGAGCAGCCAACTGGGGAAG AGAGTGGGGCTGTTGAAGAAGGACGCACTGAAAATGAAGAAGTCGAGGAGTTAAGTGATGAGACCTCCGAACCGGGAGGT GAGTGA
Upstream 100 bases:
>100_bases CGACCACTTTGCGGTACTTTTTCCTCATGGGCTGAAATTAGGCTGAGGGACCAATAAGCTTTTTTATCAACTTCCAGAGA TTTTTCCTGGAGGTGGTAGA
Downstream 100 bases:
>100_bases ATGGACTTCTTCTTTTATCCCAAGAGCGTCGCGATCTTTGGCTCCTTCAAGGAGGGTGCGATAGCCTACGAGATTCTCAG GAACATCGTCGAAGGTGGCT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKKLIAFILTILLLTPLVSEVNAAGNSQPLFKIEIMIRVSPVVINGSSTWMGQFRIYATLKDPGYRAYFDHLAANNTTKA NEEFRSFVKQLIYDNLKNNFKDRFEAKGINSTIYLPSGGPVKVLDNWSAVVTFALSNFLVSDGKIISCPLSGPMDFVFKG HVFDYSWDKLTVVLPKDYEVRNLAPAPDDFSNNVAVWTNGDFIPLIELYTPVYSYVIFLNSTRKEISLQYDPHEGYVQFN ATFTGANATPVVIDQLLSSFKATMDIISLDTREENGTLVVIGVAKPKVAYRETSSEKIWEALLKLPGSFDRVSVVGGTYK MAPDNTIVITVTEKKTSRLPYIWAGLILVVVLGILWIKRRGTSSEEPEQPTGEESGAVEEGRTENEEVEELSDETSEPGG E
Sequences:
>Translated_401_residues MKKLIAFILTILLLTPLVSEVNAAGNSQPLFKIEIMIRVSPVVINGSSTWMGQFRIYATLKDPGYRAYFDHLAANNTTKA NEEFRSFVKQLIYDNLKNNFKDRFEAKGINSTIYLPSGGPVKVLDNWSAVVTFALSNFLVSDGKIISCPLSGPMDFVFKG HVFDYSWDKLTVVLPKDYEVRNLAPAPDDFSNNVAVWTNGDFIPLIELYTPVYSYVIFLNSTRKEISLQYDPHEGYVQFN ATFTGANATPVVIDQLLSSFKATMDIISLDTREENGTLVVIGVAKPKVAYRETSSEKIWEALLKLPGSFDRVSVVGGTYK MAPDNTIVITVTEKKTSRLPYIWAGLILVVVLGILWIKRRGTSSEEPEQPTGEESGAVEEGRTENEEVEELSDETSEPGG E >Mature_401_residues MKKLIAFILTILLLTPLVSEVNAAGNSQPLFKIEIMIRVSPVVINGSSTWMGQFRIYATLKDPGYRAYFDHLAANNTTKA NEEFRSFVKQLIYDNLKNNFKDRFEAKGINSTIYLPSGGPVKVLDNWSAVVTFALSNFLVSDGKIISCPLSGPMDFVFKG HVFDYSWDKLTVVLPKDYEVRNLAPAPDDFSNNVAVWTNGDFIPLIELYTPVYSYVIFLNSTRKEISLQYDPHEGYVQFN ATFTGANATPVVIDQLLSSFKATMDIISLDTREENGTLVVIGVAKPKVAYRETSSEKIWEALLKLPGSFDRVSVVGGTYK MAPDNTIVITVTEKKTSRLPYIWAGLILVVVLGILWIKRRGTSSEEPEQPTGEESGAVEEGRTENEEVEELSDETSEPGG E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44626; Mature: 44626
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIAFILTILLLTPLVSEVNAAGNSQPLFKIEIMIRVSPVVINGSSTWMGQFRIYATL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCEEEEEEEEEEEE KDPGYRAYFDHLAANNTTKANEEFRSFVKQLIYDNLKNNFKDRFEAKGINSTIYLPSGGP CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC VKVLDNWSAVVTFALSNFLVSDGKIISCPLSGPMDFVFKGHVFDYSWDKLTVVLPKDYEV EEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECEEEEECCCEEEEECCCCCCC RNLAPAPDDFSNNVAVWTNGDFIPLIELYTPVYSYVIFLNSTRKEISLQYDPHEGYVQFN CCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHEEEEEEECCCEEEEEEECCCCCEEEEE ATFTGANATPVVIDQLLSSFKATMDIISLDTREENGTLVVIGVAKPKVAYRETSSEKIWE EEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCCEEECCCCHHHHHH ALLKLPGSFDRVSVVGGTYKMAPDNTIVITVTEKKTSRLPYIWAGLILVVVLGILWIKRR HHHHCCCCCCEEEEECCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC GTSSEEPEQPTGEESGAVEEGRTENEEVEELSDETSEPGGE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKLIAFILTILLLTPLVSEVNAAGNSQPLFKIEIMIRVSPVVINGSSTWMGQFRIYATL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCEEEEEEEEEEEE KDPGYRAYFDHLAANNTTKANEEFRSFVKQLIYDNLKNNFKDRFEAKGINSTIYLPSGGP CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC VKVLDNWSAVVTFALSNFLVSDGKIISCPLSGPMDFVFKGHVFDYSWDKLTVVLPKDYEV EEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECEEEEECCCEEEEECCCCCCC RNLAPAPDDFSNNVAVWTNGDFIPLIELYTPVYSYVIFLNSTRKEISLQYDPHEGYVQFN CCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHEEEEEEECCCEEEEEEECCCCCEEEEE ATFTGANATPVVIDQLLSSFKATMDIISLDTREENGTLVVIGVAKPKVAYRETSSEKIWE EEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCCEEECCCCHHHHHH ALLKLPGSFDRVSVVGGTYKMAPDNTIVITVTEKKTSRLPYIWAGLILVVVLGILWIKRR HHHHCCCCCCEEEEECCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC GTSSEEPEQPTGEESGAVEEGRTENEEVEELSDETSEPGGE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA